Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01940 ATGGAGGTCCTTGCAAATTTCCTTTCCAATCCGTTGGCTTCAGGAGGAGACAGTGATGCTGCAGGATGGCCTAATTTGGCTTTTGATCTTGACCCCGCACTAGTAAATGCTGCTAAAAAAGCCGGCTTTCCAATTCACTATGGGGATGGATCACATCCTGCTGTTCTTCAGTCGGTCGGTATCTCTTCTCCAAAAGCTATTATGGTTATGTTCACCGGAAAGGAAAAGACAGCAGAAGCTGTTCAGAGGCTACGGTTTACTTACCCTGCAATCCCAATCTATGCCAGAGCTAAAGATCTTGAGCATTTTTTAGATCTGAAGAAAGCAGGTGCAACAGATGCCGTTTTGGAAAATGCAGAGATTAGCTTACAGCTGGGTTCTAAGCTTCTGAAAGGTTTCGGAGTGATGTCGGATGACCTAGCATAA 426 0.4507 MEVLANFLSNPLASGGDSDAAGWPNLAFDLDPALVNAAKKAGFPIHYGDGSHPAVLQSVGISSPKAIMVMFTGKEKTAEAVQRLRFTYPAIPIYARAKDLEHFLDLKKAGATDAVLENAEISLQLGSKLLKGFGVMSDDLA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01940 141 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 22 129 IPR036291 -
Aip05g01940 141 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 3 140 - -
Aip05g01940 141 Gene3D - 2 141 - -
Aip05g01940 141 ProSiteProfiles RCK N-terminal domain profile. 2 123 IPR003148 GO:0006813
Aip05g01940 141 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 3 140 - -
Aip05g01940 141 Pfam TrkA-N domain 23 115 IPR003148 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01940 Aip-Chr5 61848095 61849158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01940 2 141 Inorganic Solute Cotransporters AT4G04850 70.000 8.31e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01940 - - aip:107643638 276.174