Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01920 atgaaaaAGCTCATCTACGGCGCTTGCACTCTCTCATCTGTTGGGGCTCCCTCCATCATCTCCCCTAACCTGTCTCTGCTGGCGCTCGCACTCCCTCGGCGCTCACTACTCACCGCGTCGGAACGGTGGAAGTTTCGGTTTGGTGAACGAGGACCTTCTCCAGAACATTCTGGCGAGGCTCTGGCTCGTTGGTTCGCTTCCGCTGCTTGCGTCAGCAAATCATGGAGCTTTGTCTGCAATCGAATCCTTACTCGTCCAAAGCTCTCTTTTGCTCTTTCTCTCAATCCTTCACTTTCCTATGGTAAAGATTATGAGTTTGATGCTCCAGTGAAGCTCCTAGAGAAACATCTACATGCTATGGCACAATCTGTTGTTGAGCAACTTGTTGTTTCTCAGGTTCTCGTGTCTGACATTAAGATTGGATATAAGATAGTTAACACTCAGGTTCTTGCTTTCAATGGTAAGCCTGTGAAGAATTTGAAGGGCTTGGCCACCATGGTTGAGAACTGTGATGATGAGTCTCTAAAGTTTGATCTGGAATACCAACAGGCTGATAAGCTTTTGTCCCTAGAATTCCAACCTTCTATAGTTTTTATTAATTTTGATTTTCCCAAGAATTCAAAAACTTATCTCCACAAGGTCGGTCGCTCAGGGAGGTTTGGGCATCTTGGTTTAGCAGTTACCTTGATCACTTATTGGGACCGCTTTAATTTGATTGAACAAGAATTTGGAATTGAAATAAAGCAAATTCCACCACACATTGACCAGTAA 771 0.4436 MKKLIYGACTLSSVGAPSIISPNLSLLALALPRRSLLTASERWKFRFGERGPSPEHSGEALARWFASAACVSKSWSFVCNRILTRPKLSFALSLNPSLSYGKDYEFDAPVKLLEKHLHAMAQSVVEQLVVSQVLVSDIKIGYKIVNTQVLAFNGKPVKNLKGLATMVENCDDESLKFDLEYQQADKLLSLEFQPSIVFINFDFPKNSKTYLHKVGRSGRFGHLGLAVTLITYWDRFNLIEQEFGIEIKQIPPHIDQ 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01920 256 PANTHER - 99 184 - -
Aip05g01920 256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 249 IPR027417 -
Aip05g01920 256 Gene3D - 88 211 IPR046449 -
Aip05g01920 256 Pfam PDZ domain 96 182 IPR041517 -
Aip05g01920 256 PANTHER DEGP PROTEASE 9-RELATED 99 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01920 Aip-Chr5 58733595 58739000 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01920 197 255 Eukaryotic Initiation Factors Gene Family AT5G11170 41.935 2.28e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01920 K25897 - ahf:114925348 454.907