Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip05g01912 | ATGTGGTCTCGTCGCGATCCTGATGTGAGAAAAAGTGGCAGAGAGAATGTTTTTATTAAGAACTTAGATGAATCCATAAATAATGCAGGATTACATGATTTATTTCAAAAGTTTGGAAATATCTTATCCAGCTTTGGGAATTGCTTTGGTGCTTCAAATTGGTTTAGAGGGAGTGATGATAGTGATACTGCTGAGAAGCCACGGGAACGAGGTAATAGAATTGAGGTTGTGACTAATTGA | 240 | 0.375 | MWSRRDPDVRKSGRENVFIKNLDESINNAGLHDLFQKFGNILSSFGNCFGASNWFRGSDDSDTAEKPRERGNRIEVVTN | 79 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip05g01912 | 79 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 17 | 43 | IPR000504 | GO:0003723 | |
Aip05g01912 | 79 | MobiDBLite | consensus disorder prediction | 59 | 73 | - | - | |
Aip05g01912 | 79 | PANTHER | POLYADENYLATE-BINDING PROTEIN | 1 | 45 | - | - | |
Aip05g01912 | 79 | Gene3D | - | 4 | 77 | IPR012677 | - | |
Aip05g01912 | 79 | MobiDBLite | consensus disorder prediction | 57 | 79 | - | - | |
Aip05g01912 | 79 | PANTHER | RNA BINDING PROTEIN | 1 | 45 | - | - | |
Aip05g01912 | 79 | SUPERFAMILY | RNA-binding domain, RBD | 2 | 44 | IPR035979 | GO:0003676 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip05g01912 | Aip-Chr5 | 58281948 | 58282292 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip05g01912 | 1 | 43 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 65.116 | 1.87e-14 | 64.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip05g01912 | K13126 | - | aip:110271131 | 159.844 |