Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01908 ATGCGGGCGAAAGGTATGAATATAGGTGGAAGAGGAATGGCATGTTGCAAAAGTAATGTACAGGAAGGAGGCAAATCGATGGTGACCAGCATGGATCATTGGATTGACCTCAAGGCTGAAGGTTATGACATGAGAATTGAAGCTGAAGAAACTGTAGCTGAATGTGAAGGGAAGGAAGATCCGATTTGTGATGAATTAAACAGGGTGAAAGGTCTCCGAGTAGAAGATATCCTTCGAATGGAGTTTTGTACTTCTAAAGAAGCACGATGTTTTTATAATAGCTATAGTCGATTGAAAGGATTTTCCATGAGGCAGGGGAAAAAGGTACCGAATAAGGTAGGAGAGATTGTTAGGTATACATTCGTGTGCAACAGGAAAGGGTTTCGTGATAAGAAATGGTTGGAGAAGGCTGATCAAAAGAGGGAGCACAAGTTTTTGGACAGCCATAACCATGAGCTCATAGCTGGGAAGTATGTTGACTATCTGAGGTTGCATAGGGGGCTATCTGATGTTGAAATTGCTCATTTGACTAGCTTGAGGGAGGTGGGTATAAGCATACCAAAAATATATCAGTCATTTGCAGCACATGTTGGTGGTTTTAACCTCACCAGGTTCACTAAGCAAGACATGTATAACGAGGTTAGAAAGCAAAGAAGCTTGCAGAATAGGGATGTTAATGCAGCAGTTCGCTATTTGGAAGGTGTAGCTCGTGTGGATAACAGGATGTACTAA 732 0.4194 MRAKGMNIGGRGMACCKSNVQEGGKSMVTSMDHWIDLKAEGYDMRIEAEETVAECEGKEDPICDELNRVKGLRVEDILRMEFCTSKEARCFYNSYSRLKGFSMRQGKKVPNKVGEIVRYTFVCNRKGFRDKKWLEKADQKREHKFLDSHNHELIAGKYVDYLRLHRGLSDVEIAHLTSLREVGISIPKIYQSFAAHVGGFNLTRFTKQDMYNEVRKQRSLQNRDVNAAVRYLEGVARVDNRMY 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01908 243 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 56 138 - -
Aip05g01908 243 Pfam FAR1 DNA-binding domain 91 141 IPR004330 -
Aip05g01908 243 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 56 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01908 Aip-Chr5 57601150 57603584 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g01908 FAR1 5.6e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01908 - - aip:107640600 353.984