Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01899 ATGTTAAATGTTGATGTGATTGGGAACAAGAAAAGGAAGAGATGTGGGAGGGTTTTCAGGTTCAAGAACTTCGGCGAACCGGGTTACCCAGTTATGTTTACTGGTCCATTTCGTGAGAATGTGAATGCACTTCTTGAATATGCGAATTTGGAGAGTAACTTGGGAATGGGAATGCCAATGTGGTCTTTTCAGCTTGAAGTTCATCACCACCCTCCTTTGCATATTTTCTTGTTTGTGATTGAAGAACCAATTGAAGCTTCTTTGAATCGCCACTGCAAGCATTGTCAATATGTTGGATGGGGCCACCATTTCATTTGCAACAAGAAGTATCATTTCGTATTACCCTCGAAGGAGGCATTGGCTACATGCTCGAGCTGTGAAGGGTGCTGTGATGCTATTGCCACAATGAACAACAACAACAACAACAATAATAATAATGGTAAGTCCAAATTAATAGAATTACAGGGCCATATGATGCATGGTGTTTTTCACTCTAATGGATTCGGCCATTTGCTATGTGTCAATGGCTTGGAAACCGGTTCCAATTTGGCTGGCAACCAGATCATGGACTTTTGGAATCGTTTGTGCATTGGATTGCAAGCAAGGAAAGTGAGTTTGAATGACACTGCACAGAAAAGAGGCATGGAACTTAGACTTATAAATGGAATAGCATATAGTGAGCCATGGTTTGGTCGCTGGGGCTACAAATTTGGAAGAGGTTCCTTTGGTGTGACACAATCCATGTACCAAAAAGCCATAGAAGCAATAAGGAGCATGCCACTCTACTTGCTCATACACCACATTGGCGCCAACAATTTCAACCACCACGAAGTGCCCGTCATTTTCTCACGCTACCAAACCCTGTCCGGCCAATCGCTAGTCACACTCGGCGACTTATTTCGCTACATGCTCGAGCTAAAGTCGCGCCTCCCGCGGGAGACGCGAGTTATTGGTAACAATAATTATACTTGTTCCTACAACAACACTAGTAGTACTAGTGCCAGTGCATTGGTTGAGTCCAATAATAATTGCCGTTGGTCACCTAAGAGGATTGAAATGGCAACAAGGGTAATTGTTGAGGCATTGAAGAGAACAGAGTTTAGATGGATTTCAAGACAAGAAGTTAGGGATGCCGCACGTGCTTACATTGGTGACACTGGTTTATTGGATTTTGTGCTAAAGTCACTAGGGAATCATGTTGTTGGGAACTACTTGTACATCCTAATTGACCCTAAACCAATGATGGGGTTGGAGTTTCTCTCAGCCATACCGTTGGCGGCTAGGATAATTCTCGACACCAAGTTTCTCGTCAAAGACTACTCTGGCGAGGTTCCCACTTTTGGAGTTGAGTTAGGCTCGGATGGAAAACTGAACCTTTATTGCACAATTTTGTTGAGGAACAATTCATGCATTGATGAGGA 1421 0.4328 MLNVDVIGNKKRKRCGRVFRFKNFGEPGYPVMFTGPFRENVNALLEYANLESNLGMGMPMWSFQLEVHHHPPLHIFLFVIEEPIEASLNRHCKHCQYVGWGHHFICNKKYHFVLPSKEALATCSSCEGCCDAIATMNNNNNNNNNNGKSKLIELQGHMMHGVFHSNGFGHLLCVNGLETGSNLAGNQIMDFWNRLCIGLQARKVSLNDTAQKRGMELRLINGIAYSEPWFGRWGYKFGRGSFGVTQSMYQKAIEAIRSMPLYLLIHHIGANNFNHHEVPVIFSRYQTLSGQSLVTLGDLFRYMLELKSRLPRETRVIGNNNYTCSYNNTSSTSASALVESNNNCRWSPKRIEMATRVIVEALKRTEFRWISRQEVRDAARAYIGDTGLLDFVLKSLGNHVVGNYLYILIDPKPMMGLEFLSAIPLAARIILDTKFLVKDYSGEVPTFGVELGSDGKLNLYCTILLRNNSCIDE 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01899 473 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 404 469 - -
Aip05g01899 473 PANTHER PHD FINGER PROTEIN MALE STERILITY 1 404 469 - -
Aip05g01899 473 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 8 405 - -
Aip05g01899 473 PANTHER PHD FINGER PROTEIN MALE STERILITY 1 8 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01899 Aip-Chr5 55468704 55491745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01899 10 405 PHD Transcription Factor Family AT5G22260 57.393 8.53e-158 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01899 - - adu:107489498 801.586