Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01888 atgcatagCACCGTCACTTCATCTTCACTCTCGAACCCAGCAGCTTCCTTCGGCGTTCATCGTTCAGCTTCATCGCACCCAGTAGCCTTCATCACTACCCTTCATCTCACCCAGCCTTCATCGCCTTCGTCGCACCAGTCATCTTCGTCGAGCAGTCGTTGTCTTGAGCTTGCCGTCGCCACCACCGTGGTCTTCCTCGAGCTTGCCAAAACCCTAACCTCCATCACGCCGCCATCTATCTCACCGTCGCCTCCCTTAGCGCTGAAGATCGCAACCAGGTTCGTCCTTGAATGCCATTCTTCTTACTGTTTTGCTTGTCGTCCCTCTCGCCGTTCTGCTCGGAAAGCTGCTCACCTCTGTCTCATGGTTCTGCTCACCACTGTCTCGCGGTTCTGCTCGCCGTGCTGCTCGATGATTATACTTTGCTCATCCATGAAACATTTCCGTGGATCTAAGAAATATACAATCCTTGGAGAGCTATATAAATCTTACTCTGAGTTATGCAAATCATCATTGATTCCCCCAACAGGAATCTTGGAATTCTCAAACATGTGCAGAGTGCTTAATGACCAGGTATCTGAAACAAAGCAGTACAGAAGTTGA 603 0.4925 MHSTVTSSSLSNPAASFGVHRSASSHPVAFITTLHLTQPSSPSSHQSSSSSSRCLELAVATTVVFLELAKTLTSITPPSISPSPPLALKIATRFVLECHSSYCFACRPSRRSARKAAHLCLMVLLTTVSRFCSPCCSMIILCSSMKHFRGSKKYTILGELYKSYSELCKSSLIPPTGILEFSNMCRVLNDQVSETKQYRS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01888 200 Pfam CDC6, C terminal winged helix domain 141 191 IPR015163 -
Aip05g01888 200 Gene3D - 133 192 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01888 Aip-Chr5 54643444 54648082 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01888 134 192 Core DNA Replication Machinery Family AT1G07270 59.322 4.59e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01888 K02213 - gmx:100791200 95.5153