Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01878 ATGACACTCTGTGAAGAACCTAGCTGCGCTCGCGATGTCTCCGCCGGTTCTGGCACCCCTAACCCTCATTCTGCGGGTTTTGGCTATTCACTTTTGGATCACCAGGTTATTCCTGGATACGGACATGGTGTTTTGCACAAAACAGATCCAAGATACACATGCCAGAGGGAGTTTGCTTTGAAGCATTTGCCAAATGATCCATATTTCCAGCTGCTCTCAGAAAATCCAAGAAAATCCAAGTTCTGGGTTGATTCTTTTCTGGTTCAGCTGCAAGGAAACTGGTGCACTTCAAGAAGCAAAGGACAAACTTTAAGAAACGGTCGAGGAACTCACCTGGCGTCTCCAACTAGAAAAAAGTTCGCGGGTGAGAGTGTTGTTCATTTTGCTACCAACCTCGAAGAATCCAAAGCACAAGAGATATCAAAACTGCAGAATTCATTACAGGAGATACAGGGTAAACGTGATGAAACCAATGCTCTGCAGGGTAAACTTGATGAAACCAATGCTCTGCTTGTCAAGGAGCGAGAGAATGTAGAGAAGGTTATCATCGAAGCAACTCCGGTTATCCAAGAAAAGGAGGTTATTGTTGAAGACACTGCAAAGATTGATGCACTAACAGTGGAAGTTGAGAGGCTAAAGTACTGTGAGAAGTATGCTAAAGCTGAAGATGTAGGAGCTGCACCAGAAGAGAAATCAAGTGATGATGAGGAAATAAGTGAAGCTCAATATGATTCAAGTGATGAACAGGTTGCTGGTAAAGCAGATCCTTAG 771 0.4384 MTLCEEPSCARDVSAGSGTPNPHSAGFGYSLLDHQVIPGYGHGVLHKTDPRYTCQREFALKHLPNDPYFQLLSENPRKSKFWVDSFLVQLQGNWCTSRSKGQTLRNGRGTHLASPTRKKFAGESVVHFATNLEESKAQEISKLQNSLQEIQGKRDETNALQGKLDETNALLVKERENVEKVIIEATPVIQEKEVIVEDTAKIDALTVEVERLKYCEKYAKAEDVGAAPEEKSSDDEEISEAQYDSSDEQVAGKADP 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01878 256 MobiDBLite consensus disorder prediction 222 256 - -
Aip05g01878 256 Gene3D - 25 81 IPR016143 -
Aip05g01878 256 Coils Coil 133 160 - -
Aip05g01878 256 SUPERFAMILY Citrate synthase 33 74 IPR036969 GO:0046912
Aip05g01878 256 PANTHER CITRATE SYNTHASE 33 74 - -
Aip05g01878 256 PANTHER CITRATE SYNTHASE 33 74 IPR002020 GO:0046912
Aip05g01878 256 Pfam Citrate synthase, C-terminal domain 34 74 IPR002020 GO:0046912
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01878 Aip-Chr5 53487006 53491799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01878 130 213 Myosins gene family AT1G54560 55.952 5.46e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01878 K10357 - adu:110279188 123.25