Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01871 ATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTATTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTCTTCTGAGGGTGAAGTTAGGAATTGGTGTATTCAAGTTTTCCAAGGTCTTGCTTATATGCACCAGCGGGGATACTTCCACCGTGATCTGAAGCCTGCAAATGGAGATTTATACTATGGTCTATTCTGA 249 0.3976 MNHPNIVKLKEVIRESDILYFIFEYMECNLYQLMKDREKMSSEGEVRNWCIQVFQGLAYMHQRGYFHRDLKPANGDLYYGLF 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01871 82 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 74 - -
Aip05g01871 82 ProSiteProfiles Protein kinase domain profile. 1 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01871 82 Gene3D Transferase(Phosphotransferase) domain 1 24 75 - -
Aip05g01871 82 Pfam Protein kinase domain 1 74 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01871 82 SUPERFAMILY Protein kinase-like (PK-like) 2 74 IPR011009 -
Aip05g01871 82 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 74 - -
Aip05g01871 82 Gene3D Phosphorylase Kinase; domain 1 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01871 Aip-Chr5 51378467 51378977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01871 1 74 Core Cell Cycle Gene Families AT1G66750 36.486 5.35e-16 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aip05g01871 Pkinase 1.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01871 K08829 - ahf:112747058 155.606