Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01868 ATGTACCGGACGGTGAAAACTACAGATAGAGCAGGGGCTTCTTCAGGGCAATCTGATGTATATGATAATAGATCATCGGGTGACACATCTAAAGACATAATGTTTGACATAAACTCACCATCAACAAGGAGGTCTGATCTATCCGCAACGTATTGTTCTTTCATTAAACACAAGGAGAGTGCAATTGTTTGGCGCCATCAAGAAGCCGATCCTTATTTTGGATCATGCGAATCCAAAGAGCTTCTTGATCACCTTGAGAATGTGCTGGCCAATAAGCCTGTTGTTGTTAAATTGGGACAACACATAGTTGAAGTGAAACCTCAAGTAGACAAAAATAAAGGTGTGAGTAAGGGTATAGTTGTGGAGAATCTAATCTCAAACATGAGGAGTGAGGGTAAATCACCAGATTTTCTGTTGTGCATTGGGGACGATTGA 435 0.4092 MYRTVKTTDRAGASSGQSDVYDNRSSGDTSKDIMFDINSPSTRRSDLSATYCSFIKHKESAIVWRHQEADPYFGSCESKELLDHLENVLANKPVVVKLGQHIVEVKPQVDKNKGVSKGIVVENLISNMRSEGKSPDFLLCIGDD 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01868 144 Gene3D - 114 144 IPR023214 -
Aip05g01868 144 MobiDBLite consensus disorder prediction 1 25 - -
Aip05g01868 144 Pfam Trehalose-phosphatase 47 144 IPR003337 GO:0003824|GO:0005992
Aip05g01868 144 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 43 144 - -
Aip05g01868 144 Gene3D - 45 108 - -
Aip05g01868 144 SUPERFAMILY HAD-like 50 144 IPR036412 -
Aip05g01868 144 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 43 144 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01868 Aip-Chr5 50598076 50599085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01868 47 144 Trehalose Biosynthesis Gene Families AT2G18700 69.697 2.19e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01868 K16055 - gmx:100810498 149.058