Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01860 ATGCTCAAGGTTAAGAGTGATGGCCAATTTTCGGCTTACTCAAGTGAACCTCCAAAGAAGTTCCAAGTGAATGGTTCTGATGTGGATCTTGAGTGGCTTCCTAACGGCAAATTGATAGCTGGGAAATTTGAAGCCAAATTCTTTGATAAGATTCTTCAAGAAGAAATTGGTGATGTTAAAGGGAATTTTGGACCAATTAATGCATTAGCCTTTAACCCTGATGGGAAAAGGTATCACCGCTGTTCTTCCTTCCCCTCCCCTTCCCGTTTGAAATTTTCATGTTGCAACATGGATTCATGGAATGCTAGTATTCTTTCATTATTGGAACTTTACCACAACTTAGTTATGCTAGTTAGCACTTCCAATGTTGAAAACTACGGCCATGATTATATTACCCTTACCATTTTAATGGTTAATTGTTGA 423 0.383 MLKVKSDGQFSAYSSEPPKKFQVNGSDVDLEWLPNGKLIAGKFEAKFFDKILQEEIGDVKGNFGPINALAFNPDGKRYHRCSSFPSPSRLKFSCCNMDSWNASILSLLELYHNLVMLVSTSNVENYGHDYITLTILMVNC 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01860 140 Gene3D - 1 84 IPR015943 GO:0005515
Aip05g01860 140 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 40 78 - -
Aip05g01860 140 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 40 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01860 Aip-Chr5 47962334 47963362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01860 40 78 Eukaryotic Initiation Factors Gene Family AT2G46290 82.051 2.28e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01860 K03246 - csin:114266880 77.0257