Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01847 ATGGACACCACCTCCGACGGAGACACGTCCGCGTCGAACAGAGAGAAGGCTAAGGAGAAGGAACGGCTTCTAGAAGAGGATCCCTCCCTCGTGCATGCACGTGACTATGACAACCGAACGCCCCTCCACGTGGCCTCCCTCCACGGCTGGGCCGACGTTGCCAGCTGCCTCATAGAGTTTGGTGCTGACGTCAACGCCCAAGACCGATGGAGAAACACGCCCCTGGCTGATGCGGAAGGAGCAAAGAGGAATTCAGTGATTGTGCTTTTGAAGTTACGTGGAGGATTGTCTTACGGCCAAAATGGAAGTCATTTAGAACATAGGCCTGTTCCACCCCCATTGCCTAACAAGTGTGATTGGGAAGTTGACCCTACAGAGCTGGACTTCTCGAATTCAATTTGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAGAGCTCATTGGCGTGGAACACCTGTTGCTGTCAAACGCATTCTTCCAGCTCTTTCAGATGATAGACTGGTGATTCAGGACTTCAGGCATGAGGTTAATTTGCTAGTGAAACTTCGCCACCCTAATGTTGTTCAATTCCTTGGAGCTGTTACTGATAGGAAGCCTCTAATGTTGATTACTGAGTATCTAAGAGGGGGTGATCTTCATAGGTACCTCAAGGTTAAAAGTTCACTTAGTACTTCAACAGCGATCAACTTTGCCATGGATATTGCCAGAGGGATGGCCTATCTTCACAGTGAACCAAATGTTATAATTCATCGAGATCTCAAGCCAAGGAATGTTCTTTTGGTCAATTCTTGTGCCGACTATTTAAAAGTAGGAGATTTTGGACTTAGCAAGCTTATTAAAGTCAAAAGTTCTCATGATGTGTACAAGATGACTGGTGAAACTGGAAGTTATCGCTATATGGCTCCTGAAGTTTTCAAACACCGGAGATATGACAAGAAGGTTGATGTGTTCTCCTTTGCTATGATTTTGTATGAGATGCTTGAAGGTGAACCACCATTTACAAATTTAGAACCTTATGAGGGAGCCAAGCATGTGGCTGAGGGACACAGGCCAATTATTCGAGCGAAAGGTTATGGTCCTGAACTACGAGAGTTAATAGAGCTTTGTTGGGCTGGTGACATGACTCAAAGACCTTCCTTCCTAGATATCCTTAAACGGCTTGAGAAGATCAAAGAAAAACCTTCAGAGCATCACTGGCATTTGTTCTCTTCATAA 1215 0.4527 MDTTSDGDTSASNREKAKEKERLLEEDPSLVHARDYDNRTPLHVASLHGWADVASCLIEFGADVNAQDRWRNTPLADAEGAKRNSVIVLLKLRGGLSYGQNGSHLEHRPVPPPLPNKCDWEVDPTELDFSNSICIGKGSFGEILRAHWRGTPVAVKRILPALSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTDRKPLMLITEYLRGGDLHRYLKVKSSLSTSTAINFAMDIARGMAYLHSEPNVIIHRDLKPRNVLLVNSCADYLKVGDFGLSKLIKVKSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFTNLEPYEGAKHVAEGHRPIIRAKGYGPELRELIELCWAGDMTQRPSFLDILKRLEKIKEKPSEHHWHLFSS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01847 404 Pfam Ankyrin repeats (many copies) 23 75 IPR002110 GO:0005515
Aip05g01847 404 Gene3D Transferase(Phosphotransferase) domain 1 209 401 - -
Aip05g01847 404 PIRSF ILK 10 404 - -
Aip05g01847 404 Gene3D Phosphorylase Kinase; domain 1 121 208 - -
Aip05g01847 404 SMART serkin_6 129 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01847 404 Pfam Protein tyrosine and serine/threonine kinase 135 387 IPR001245 GO:0004672|GO:0006468
Aip05g01847 404 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 23 396 - -
Aip05g01847 404 SUPERFAMILY Ankyrin repeat 27 90 IPR036770 -
Aip05g01847 404 MobiDBLite consensus disorder prediction 9 29 - -
Aip05g01847 404 ProSitePatterns Protein kinases ATP-binding region signature. 135 156 IPR017441 GO:0005524
Aip05g01847 404 ProSiteProfiles Protein kinase domain profile. 129 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01847 404 ProSiteProfiles Ankyrin repeat region circular profile. 37 69 - -
Aip05g01847 404 PRINTS Tyrosine kinase catalytic domain signature 242 260 IPR001245 GO:0004672|GO:0006468
Aip05g01847 404 PRINTS Tyrosine kinase catalytic domain signature 358 380 IPR001245 GO:0004672|GO:0006468
Aip05g01847 404 PRINTS Tyrosine kinase catalytic domain signature 204 217 IPR001245 GO:0004672|GO:0006468
Aip05g01847 404 Gene3D - 9 120 IPR036770 -
Aip05g01847 404 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 23 396 - -
Aip05g01847 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Aip05g01847 404 ProSiteProfiles Ankyrin repeat profile. 37 69 IPR002110 GO:0005515
Aip05g01847 404 SUPERFAMILY Protein kinase-like (PK-like) 128 395 IPR011009 -
Aip05g01847 404 CDD STKc_MAP3K-like 135 387 - -
Aip05g01847 404 SMART ANK_2a 37 66 IPR002110 GO:0005515
Aip05g01847 404 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01847 Aip-Chr5 45041526 45052145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01847 12 404 MAP Kinase Kinase Kinase AT1G14000 79.949 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Aip05g01847 PK_Tyr_Ser-Thr 1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01847 - - gmx:100789273 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01847 05 45041526 45052145 Aip05g01847 05 45041526 45052145 ECH