Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01842 ATGGAGGAAGCACAAGGCCAGTATTATTCTTCCACTCCACAAGAATCTGCATTATCTCATGATGATGGTGGAGGGAGGTCTCAGCTCAACGGCCAAGGGAATTGCGGGACTGGTATCATAGGCCTGAAGAAGAGAGGTCATGGAACTCGCTCTTGGATAAAAATTGGTCAGGATGGGGGTACTCAGACCGTAACACTTGACAAGGCTACCATTATGAGACATTGTTCTTTGCCTTCCAGAGATCTTAGACTATTGGATCCAATGTTCATTTATCCTTCTACCATATTAGGACGGGAGAAGGCTATTGTTGTAAACCTTGAGCAAATCCGTTGTATAATTACTGCTGATGAGGTCATCCTGATGAATTCATTGGATGGTAGTGTTGGTCAGTATAGGTCAGAATTATGCAATCGGCTTCAGAAAGAAAAAGCTGATGGTCTGCCTTTTGAGTTTAGAGCGTTGGAAATGGCTCTGGAGTTGACATGCACATCTTTAGATGCTCAGGTAAAAGAGTTGGAAATGGAAATATATCCTGTGCTAGATGAATTAGCATCGTCTATCAGTACTCTGAATTTAGAACGTGTTCGAAGATTCAAAGGTCATCTCCTTGCTTTGACTCAACGAGTTCAGAAGGTACGTGACGAAATAGAACATCTCATGGATGATGATGGTGATATGGCTGAGATGTGCCTTACTGAGAAAAGGAGAAGCTCAGATATGTACCCTCTTAATGATTGTCTTCACACTCTTACATCAAGTAGTGGTAAAGAGATTTCAAAGTCAGCTCCTAATTCACCAGAGCGGTCAATTAGTGGGATCCCAATGTTGCCAAGGGCTTTCAGCATCATTGGAAATTCAGGCAAACATGGTAGTTCAATGGGTTCTTCTGATAATGGAGAAAGGATTCAACCACTGGAAATGTTGCTTGAAGCATACTTTATCGTCATTGATAATACGCTTAACTCATTGTCGTCGCTTAAAGAATACATTGATGACACAGAAGATTTTATCAATATAAAGTTGGGCAATATTCAAAACCGCCTAATACAGTTTGAATTGCTTCTTACTGCAGCTACATTGGTAGCAGCAGTATTTGCTGCTGTGACAGCAGTGTTTGGGATGAACTTTGAAACCACAGTTTTTGACTATCCATCTGGTTTCCATTGGGTTTTGATAGTTACCGGAATCACTTGTGCATCATTGTATTTCTCATTCTTATTCTACTTTAAGTACAAGAAAGTGCTTCCAGGGTAA 1254 0.4083 MEEAQGQYYSSTPQESALSHDDGGGRSQLNGQGNCGTGIIGLKKRGHGTRSWIKIGQDGGTQTVTLDKATIMRHCSLPSRDLRLLDPMFIYPSTILGREKAIVVNLEQIRCIITADEVILMNSLDGSVGQYRSELCNRLQKEKADGLPFEFRALEMALELTCTSLDAQVKELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKRRSSDMYPLNDCLHTLTSSSGKEISKSAPNSPERSISGIPMLPRAFSIIGNSGKHGSSMGSSDNGERIQPLEMLLEAYFIVIDNTLNSLSSLKEYIDDTEDFINIKLGNIQNRLIQFELLLTAATLVAAVFAAVTAVFGMNFETTVFDYPSGFHWVLIVTGITCASLYFSFLFYFKYKKVLPG 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01842 417 Coils Coil 202 222 - -
Aip05g01842 417 Gene3D Magnesium transport protein CorA, transmembrane region 355 414 - -
Aip05g01842 417 Gene3D Magnesium transport protein CorA, transmembrane region 127 348 - -
Aip05g01842 417 Gene3D - 41 123 - -
Aip05g01842 417 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 2 416 IPR039204 -
Aip05g01842 417 CDD Mrs2_Mfm1p-like 52 414 IPR039204 -
Aip05g01842 417 PANTHER MAGNESIUM TRANSPORTER MRS2-5 2 416 - -
Aip05g01842 417 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 354 406 IPR045863 -
Aip05g01842 417 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01842 Aip-Chr5 44128365 44131892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01842 9 416 MRS2 Gene Family AT2G03620 63.702 6.92e-172 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01842 K16075 - gmx:100803935 664.455