Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01823 ATGTTCCCTGAAGCTTGCATGAAGAAGTTTGACCCCAATGGCAGTAACAAGAGTTCCCAACACAGATCTATAACGTGTGGCAAGCAATCCCTTCCATACACCTTTTCAATTACTCTCAATTCTAGAGGAATTGGCAACTGGCAATTGGATGAGGCCTTCTCCGGTGACTACTATAATTTCACCTCTCCGGACAGCGGAGCTTTATCGGCGGTATCCAAGGACATTGTCTTTGACAAAAATAGCATGAAGCAGATCAATGAAAGGCTCTTTGCACTTAGGATAGTCATTCCCAACATCACCAAGATGGATAAGGCATCAATCATAAAGGATGGAACTGGTTAA 342 0.4327 MFPEACMKKFDPNGSNKSSQHRSITCGKQSLPYTFSITLNSRGIGNWQLDEAFSGDYYNFTSPDSGALSAVSKDIVFDKNSMKQINERLFALRIVIPNITKMDKASIIKDGTG 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01823 113 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 110 IPR036638 GO:0046983
Aip05g01823 113 PANTHER TRANSCRIPTION FACTOR BHLH35 44 110 - -
Aip05g01823 113 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 44 110 - -
Aip05g01823 113 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 69 113 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01823 Aip-Chr5 43073225 43074645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01823 46 111 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 59.091 8.85e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01823 - - adu:107496381 96.2857