Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01815 ATGGAATTGGAAGCTGATCATAATCACCATCACCATGACCATCAAAACGGAATCAGAACCAGACCTAATTTCCCTCTTCAGCTGTTGGAGAAGACTAAAGACGTCGAAGACTCAGTCGCGGAACAGCCATGCTCCACCGCGGCCGAACAACCCGGTGAGGGAGTAGGCACCGCCGTCACTTTACAGGACCAACAACAGAATAGCACCAAGAAGCCGCCGCCAAAGCGGACCTCCACCAAGGACCGGCACACCAAGGTGGACGGCCGCGGCCGCCGGATCCGGATGCCAGCGGCCTGCGCCGCTCGCGTGTTCCAGTTGACGCGGGAGTTAGGGCACAAATCCGACGGCGAGACGATCGAGTGGCTACTACAGCAAGCGGAGCCGGCGGTGATCGCCGCAACCGGCACCGGCACCATCCCCGCCAACTTCACCTCGCTCAACATCTCACTTCGAAGTTCCGGGTCTACCGTTTCGGCGCCGTCACACTACTTCAGAGGAAGCTACTTCAATCCTAGCACGTTCTCTTCGGCCGCCGTTGCGGCGGCTGTCGGCGGCGGAAGGATCCGCGGCGGAGCTGGCGATAATTGGGAGCGTAGCATGGGCATGAATATGAACATGAACATGAATATGAACATAGCAACGATGGAAGATTCTAGAAGGTTGTTGTTTCCAGGTTCATCGGAGAATTGTTCTAATTCCATGGGATTGAACTTCAACCCTAGCACCGTGAATGCCGTTCTCCAAGCAAAGCAAGAACTTCGTGAAGATGGCGCCGCCGCCGCTGGTGGTGGTGGAAATCTTGATTTGGATGGCGGTGATTGCGACGGAAACATGGCTAGAAAGAGAAGAATGGAACAAGAGGTTTCGGTTTCACACCAGATAGCAGGAAACTACTTGTTACAATCAAGTACCGCGGGTTCGGTTCCGGCGAGCCACGCTTCGAATCCCGCAACGTTTTGGATGGTGACTGGGCACCAAGGCATGAATGGTGGTGGCGGCGGCGGCGGTAGTAATAATGATCAAATTTGGGCAATTCCGTCACTGGGGAGTGGTGGTGGAGTTTATAGAGGGGGTATGCCTGGCGGTGTTGGTGGGATTCATTTCATGAATTTTGGTTCACCAATGTCTCTTATGCCTGGTGGACAACTAGGTTCCGCCATGGTTGGTGGCGGCAGCGGCGGTGGTGGAGCAATGCTGAGTGAAAGCAATAATTTAGGTATGCTTGCAGCACTTAATGCCTATAGGCAGATTCCGGCCAATGGCAGTGGCGTTTCGGAGTCTCCGGCGAGCACTGGAAACCACCAACATCACGGTGGAGATGATGGGCATGAAACAACAAGTCAACAGCAACATTCTTGA 1359 0.5445 MELEADHNHHHHDHQNGIRTRPNFPLQLLEKTKDVEDSVAEQPCSTAAEQPGEGVGTAVTLQDQQQNSTKKPPPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSHYFRGSYFNPSTFSSAAVAAAVGGGRIRGGAGDNWERSMGMNMNMNMNMNIATMEDSRRLLFPGSSENCSNSMGLNFNPSTVNAVLQAKQELREDGAAAAGGGGNLDLDGGDCDGNMARKRRMEQEVSVSHQIAGNYLLQSSTAGSVPASHASNPATFWMVTGHQGMNGGGGGGGSNNDQIWAIPSLGSGGGVYRGGMPGGVGGIHFMNFGSPMSLMPGGQLGSAMVGGGSGGGGAMLSESNNLGMLAALNAYRQIPANGSGVSESPASTGNHQHHGGDDGHETTSQQQHS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01815 452 MobiDBLite consensus disorder prediction 436 452 - -
Aip05g01815 452 ProSiteProfiles TCP domain profile. 79 133 IPR017887 -
Aip05g01815 452 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 449 IPR005333 GO:0003700
Aip05g01815 452 MobiDBLite consensus disorder prediction 1 91 - -
Aip05g01815 452 MobiDBLite consensus disorder prediction 57 73 - -
Aip05g01815 452 MobiDBLite consensus disorder prediction 419 434 - -
Aip05g01815 452 Pfam TCP family transcription factor 77 182 IPR017887 -
Aip05g01815 452 MobiDBLite consensus disorder prediction 419 452 - -
Aip05g01815 452 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 15 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01815 Aip-Chr5 42436013 42438122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01815 61 382 TCP Transcription Factor Family AT3G47620 43.137 1.39e-56 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip05g01815 TCP 1.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01815 - - adu:107489244 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01815 05 42436013 42438122 Aip05g01815 05 42436013 42438122 ECH
Aip05g01815 05 42436013 42438122 Aip01g02087 01 113187005 113189030 PCT