Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01814 ATGGTTGAGGTTCTGAAGTGTGAGTATGCTATTCGAGGAGATGTTGTAACACTTGCTCAGCAATTGCAAGAAGATTTGAAGGCTAAGCATGGTACTCACCCATTTGATGAGCGTATTAAAGGCCCGCGAGATACAATAGCCAAAGGAATTGAAGAACGTGATGGTTTTCCTGACAATCCCAATGACATTTTCTTGACAGATGGGGCAAGCCCAGCGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGGTCTGTGCCCTTCATTCTCTCCTTTCATGTCTTCTTGATTATGGGACTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAAGGCCACATTGAATTGGTATGA 468 0.4231 MVEVLKCEYAIRGDVVTLAQQLQEDLKAKHGTHPFDERIKGPRDTIAKGIEERDGFPDNPNDIFLTDGASPAIDEELLQEVVNMGFDRNQLVESLCNRIQNEVCALHSLLSCLLDYGTGDDLFKELWRLCAGPLMDVPCVQDRVFYFPQGHIELV 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01814 155 PANTHER ALANINE AMINOTRANSFERASE 2 39 75 - -
Aip05g01814 155 SUPERFAMILY UBA-like 67 118 IPR009060 GO:0005515
Aip05g01814 155 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 72 112 IPR015940 -
Aip05g01814 155 Gene3D Aspartate Aminotransferase, domain 1 2 59 IPR015422 GO:0003824
Aip05g01814 155 PANTHER ALANINE AMINOTRANSFERASE 2 3 37 - -
Aip05g01814 155 PANTHER ALANINE AMINOTRANSFERASE 3 37 IPR045088 GO:0008483
Aip05g01814 155 Gene3D - 70 111 - -
Aip05g01814 155 PANTHER ALANINE AMINOTRANSFERASE 39 75 IPR045088 GO:0008483
Aip05g01814 155 Pfam UBA/TS-N domain 73 102 IPR015940 -
Aip05g01814 155 CDD UBA_SnRK1_plant 73 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01814 Aip-Chr5 41972249 41978710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01814 103 155 B3 DNA Binding Superfamily AT1G43950 50.943 2.60e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01814 K00814 K14486 ahf:114925841 111.694