Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01789 ATGTTAGCCACTCAGGTAGTGGAAGATCTCTGTGAGTGCTATTTTAGTCCTTCATTTGAACTTCTTTCACATGATAATAAGGTAAATCCTTCTTCACGGGGCATCTACCTGAGGGAGGCTACTGCTTTCCAACAATCTACTGAGCTAGGTCTCAGCTTGGACCAAGGGAAAGGAGCCGATGGAGCAGCAGCACCAGGAGTAGGCTTCTTGAAGCCACCGGAAGAGGCCTCCGGTAGCGGCAAGCACTTTCGCGACGACGTCCTTGATGCCAGAGCTAAGAATGTTTTTCATGGCCAACCAATGCCTACTACTATTCCGGAAACTCCACATCCTCCAACAATGCGTCCTAGGGTGCGGGCTAGAAGAGGACAGGCTACAGACCCACACAGCATAGCTGAACGGCTGCGCAAAGAAAGAATAGCAGAAAGAATCAGGGCTCTACAAGAACTGGTTCCAAGTGTCAACAAGGAACAAGCTTTTGCCTTCTTCGATTCCGCCTGCTCTGCTCTTCTGCCCTGTGCTATCCGGTTCTGCCCTAATTTCCACCTTCTTCTAGATTGTCTTTTTAAGCAAtga 576 0.4896 MLATQVVEDLCECYFSPSFELLSHDNKVNPSSRGIYLREATAFQQSTELGLSLDQGKGADGAAAPGVGFLKPPEEASGSGKHFRDDVLDARAKNVFHGQPMPTTIPETPHPPTMRPRVRARRGQATDPHSIAERLRKERIAERIRALQELVPSVNKEQAFAFFDSACSALLPCAIRFCPNFHLLLDCLFKQ 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01789 191 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 124 181 IPR011598 GO:0046983
Aip05g01789 191 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 42 164 - -
Aip05g01789 191 Gene3D - 117 165 IPR036638 GO:0046983
Aip05g01789 191 MobiDBLite consensus disorder prediction 97 128 - -
Aip05g01789 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 122 157 IPR036638 GO:0046983
Aip05g01789 191 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 42 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01789 Aip-Chr5 39409226 39413296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01789 49 164 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 66.667 2.29e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01789 - - ahf:114924986 234.572