Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01784 ATGTCTTCTGGTCAGCAGCAACATCAATCACCACCACTACTTAAGAGGATAAAAACCCTTAGTGATAGGGAAAGGGAGCAGAAGTTAAGAAGAAATGGTGTCCAAGCAAATGATAAGCAGAATTTTGTAGAAAAGCCAAAAGTTGCAAGAGAAAAAGGGCAGAATTTGAAGAAAAGTAAAGTACAGATGGAAGCAAGTATGACTCACTCACAAAGATCAACATGTAGACAAGAAAAAGAACTTCCTTCTAAATCTACTGCTATGACTCACAAGAATACTATAGAAGTATATTCTAGAATGAGTCAATATTTGAAGAGAAAAGAGACCACAATTGAAGATGATATTGAAGATTGTGGCAGCTTGCAAGAAAGGCCAACTAAGAAGGGAAAAACATGTCAATTTGCTTCAATGCCGATTGATACATTTCTTAAACTTAACAATGAACCTGATGGTGAAGAGCAATTGGATGAGAATGAAGGAGATATTATAGAGGAGCCGGACAAGGATTATATTAATCCAACTGAGGCTGAGAACTTAGACAATACTTTGAAAGGCTCTGCCGCGCGGACCATCGTCGTTGCGTGCGCTGACCGTCGCCTCTTATTGCCATCTCGTACACTCACCGTCGCCGCTCAGCATCGTCGTCGCATGTGCTCACTGTCCCTGCTCAGCATCGTCGTCGTCGCTCAGCATCCTCATCGTTGCTCACCTGAGAAGAGAGCGAGGAAAAGAGTTGTGAAGAGGTATACCAGAGAAAAACAGAGGAGCTTGGATTGGAAGATTAGAGCTGCAAGCCTTCCAGGCAATGCTACTTTCTTCTTGACCTATGTGGCTCTCAAATTTTTTGTTGGCTATGGTCTTGAGCTGTCCCGGTTAGTTCCTCTTATTTTATTCCATTTGAAGAAAAAGTATCTTTGCAAGACTGATCTGGAGGTGAAAGAGGCTTGGGCTCCTAGAGATCTTGGTTATGGGACTAGAGTTCCTGGTGACATCCTCATCGTCACAATCGTTTTCTGCTATTCTGTGATTGCTCCTCTGATAGTCTCATTTAGTGCTCTGTTGCATCCGAAAAAAATTCAGGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAAGCTGGTGCTCTTGGTGATTCTGTCACTGTCTCCTGTGAGAAGAACAAGAGAGGATTAAGGATCCAAAATGAGGTCTGTGCCCTTCATTTCAGTCGGAATCAGTTGCGCTCAATGGGATAA 1239 0.4278 MSSGQQQHQSPPLLKRIKTLSDREREQKLRRNGVQANDKQNFVEKPKVAREKGQNLKKSKVQMEASMTHSQRSTCRQEKELPSKSTAMTHKNTIEVYSRMSQYLKRKETTIEDDIEDCGSLQERPTKKGKTCQFASMPIDTFLKLNNEPDGEEQLDENEGDIIEEPDKDYINPTEAENLDNTLKGSAARTIVVACADRRLLLPSRTLTVAAQHRRRMCSLSLLSIVVVAQHPHRCSPEKRARKRVVKRYTREKQRSLDWKIRAASLPGNATFFLTYVALKFFVGYGLELSRLVPLILFHLKKKYLCKTDLEVKEAWAPRDLGYGTRVPGDILIVTIVFCYSVIAPLIVSFSALLHPKKIQEKFLQERIKVGGKAGALGDSVTVSCEKNKRGLRIQNEVCALHFSRNQLRSMG 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01784 412 PANTHER CSC1-LIKE PROTEIN ERD4 260 353 - -
Aip05g01784 412 MobiDBLite consensus disorder prediction 1 85 - -
Aip05g01784 412 Gene3D - 336 410 IPR038526 -
Aip05g01784 412 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 260 353 IPR045122 GO:0005227
Aip05g01784 412 MobiDBLite consensus disorder prediction 43 58 - -
Aip05g01784 412 MobiDBLite consensus disorder prediction 17 33 - -
Aip05g01784 412 Pfam Ribosomal L22e protein family 360 397 IPR002671 GO:0003735|GO:0005840|GO:0006412
Aip05g01784 412 Pfam Calcium-dependent channel, 7TM region, putative phosphate 263 353 IPR003864 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01784 Aip-Chr5 38272766 38279599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01784 361 389 Cytoplasmic Ribosomal Protein Gene Family AT5G27770 82.759 6.69e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01784 K21989 - aip:107613884 332.413