Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01777 ATGGAGCGATCGTCGATGATAAGTAAAGGGAGTTCTTCATGCACAAGACCTGATGGGAGATCTTCATTCGTCGTGCCAGGAGCTTCTGTGGTGCTCTTTGAGGCAAACATCTTAGCTTTTTTGTCTGAAATTTCGTCAGCAGTTTTCGCCGAAGTTATGCAGTGCAATCCAGAATTTACACATCATTTGATACATAAGCTGAAGTACCATCCTGGCCAAATTGAAGCTGCTACTATTATGGAGCATATCTTAGAGGGTAGCTCTTACATCCAACAAGCCAGAATGCAATAG 291 0.4296 MERSSMISKGSSSCTRPDGRSSFVVPGASVVLFEANILAFLSEISSAVFAEVMQCNPEFTHHLIHKLKYHPGQIEAATIMEHILEGSSYIQQARMQ 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01777 96 MobiDBLite consensus disorder prediction 1 19 - -
Aip05g01777 96 PANTHER HISTIDINE AMMONIA-LYASE 28 96 IPR001106 -
Aip05g01777 96 SUPERFAMILY L-aspartase-like 27 93 IPR008948 GO:0003824
Aip05g01777 96 Gene3D Fumarase/aspartase (Central domain) 27 96 - -
Aip05g01777 96 MobiDBLite consensus disorder prediction 1 22 - -
Aip05g01777 96 Pfam Aromatic amino acid lyase 28 93 IPR001106 -
Aip05g01777 96 PANTHER PHENYLALANINE AMMONIA-LYASE 28 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01777 Aip-Chr5 37272523 37272813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01777 28 95 Monolignol Biosynthesis Gene Families AT3G10340 73.529 6.08e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01777 K10775 - gmx:100787872 116.316