Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01764 ATGGATCAGCAATATGGTTGGGTTAGAGACACAGCGACTGTTGAATTTCATAGCGCAGTGCAGAACGGAACAAGGATCGCTAATACTGCTCAGTTCATGAAGATTTATAGTAGGGAATACTTTTGTGTTGCTACAATCCAGATACTTTGCAATGGGCCTGGAACTTGCATTCCCATATGTGCAATTGCTTTCTTATTTAAGACGACGGCGGGAAGAACCGCGACGGCGAGGAAGCATTCAGATGAAGGCAGCAGCTGGATTGGAACGGCCTCGAGGCGCAGGCGCATAGAGGAGATGGGAGAGTTCTGTGATCGCCGGGTCTGCCTCGCGAAGAAGAAGAAAAAACAAGCTGCAGTCGCCATGGTTAAGTACTCCAGAGAACCCGAAAATCCTACTAAGTCTTGCAAGGCTAGAGGCTCTGATTTGAGGGTTCATTTCAAGAACACTAGGGAGACTGCCTTTGCTATCAGGAAGTTGCCGCTTGTTAAGGCAAAGAGGTATCTGGAGGACGTTTTGGCCCACAAACAGGCCATTCCATTCCGACGCTTCTGTGGTGGTGTTGGGAGGACTGCCCAGGCGAAGAACAGACATTCCAATGGACAAGGACGCTGGCCTGTAAAATCAGCTAAATTCATTCTTGATTTGCTCAAGAATGCTGAGAGCAATGCTGAGGTGAAAGGTTTGGATGTGGATGCTCTTTACATTTCCCACATCCAAGTCAACCAAGCACAGAAACAAAGACGCCGCACCTACCGTGCTCACGGAAGAATCAATCCCTACATGTCATCTCCCTGCCACATAGAGTTGATCTTATCCGAGAAGGAAGAGCCTGTTAAGAAAGAGCCGGAGTCCCAGTTGGCAACAAGCAAGAAGTCTCAAGGTCTTCGCAGTGGTGCTTCATCCTAA 906 0.4845 MDQQYGWVRDTATVEFHSAVQNGTRIANTAQFMKIYSREYFCVATIQILCNGPGTCIPICAIAFLFKTTAGRTATARKHSDEGSSWIGTASRRRRIEEMGEFCDRRVCLAKKKKKQAAVAMVKYSREPENPTKSCKARGSDLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPESQLATSKKSQGLRSGASS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01764 301 Pfam Ribosomal protein L22p/L17e 137 272 IPR001063 GO:0003735|GO:0005840|GO:0006412
Aip05g01764 301 MobiDBLite consensus disorder prediction 275 301 - -
Aip05g01764 301 Hamap 50S ribosomal protein L22 [rplV]. 120 274 IPR005721 GO:0003735|GO:0006412|GO:0015934
Aip05g01764 301 SUPERFAMILY Ribosomal protein L22 121 274 IPR036394 GO:0003735|GO:0005840|GO:0006412
Aip05g01764 301 MobiDBLite consensus disorder prediction 287 301 - -
Aip05g01764 301 Gene3D Ribosomal protein L22/L17 121 299 IPR036394 GO:0003735|GO:0005840|GO:0006412
Aip05g01764 301 ProSitePatterns Ribosomal protein L22 signature. 247 271 IPR018260 GO:0003735|GO:0005840|GO:0006412
Aip05g01764 301 PANTHER 60S RIBOSOMAL PROTEIN L17-2-LIKE 121 301 - -
Aip05g01764 301 TIGRFAM uL22_arch_euk: ribosomal protein uL22 124 274 IPR005721 GO:0003735|GO:0006412|GO:0015934
Aip05g01764 301 CDD Ribosomal_L22 135 271 IPR001063 GO:0003735|GO:0005840|GO:0006412
Aip05g01764 301 PANTHER 60S RIBOSOMAL PROTEIN L17 121 301 IPR005721 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01764 Aip-Chr5 36368989 36374045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01764 121 301 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 86.188 2.97e-113 323