Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01760 ATGGTGAAAGGTCCAGGATTCTACTCCGATATCGGCAAGAAGGCTAGAGATCTTCTGTACAAGGATTACCAGAACGATCGCAAGTTTACTCTCACCACTTACACTACCAGTGGAGTGGAAATCACTTCAACTGGTCTCAAGAAGGGCAATGTATATTTGGCGGATGTTGCCACAAAGCTGAAGAACAAGAACATCACGACTGATGTCAAAGTGGACAGTAACTCAAATCTCTTTACTACCGTTACGGTGGATGAGCCTTCACCTGGACTCAAGACAATTTTTAGCTTTATTTTTCCGGATCAAAAATCTGGCAAGGTGGAACTCCAGTACCAGCATGAGCATGCTGGAATTAGCACTAGCCTTGGATTGACGGCAAAACCCATCGTTAACTTCTCTGGTGTTGTTGGAAATAATCTTGTCACTCTTGGGACAGATGTTTCATTTGATACTGCATCTGGCAACTTAACCAAGTATAATGCAGGGTTGAGCCTCACCCATTCTGACCTGATTGCATCTTTGAGTCTGAATGATAAAGGAGACACTCTCATTGCCTCCTATCACCAGAATGTAAATATACTGACAAACACTGCTGTTGCTGCTGAGTTTTCTCATAGCTTTTCCAGCCATGAAAACAAACTCACTATCGGAACACAACATGCACTCGACCCCTTAACCTTGATCAAAGCTCGTGTCAACAACCATGGCAGGGCAACTGCTCACATCCAGCATGATTTGTCCATAAGAACCCGTTTCTCCATTACTGCTGAAGTCGACACTGGTGCCATTGACAAGAGTGCAAAGATTGGCCTTGCTTTGGCCCTGAAGCCTTAA 831 0.4428 MVKGPGFYSDIGKKARDLLYKDYQNDRKFTLTTYTTSGVEITSTGLKKGNVYLADVATKLKNKNITTDVKVDSNSNLFTTVTVDEPSPGLKTIFSFIFPDQKSGKVELQYQHEHAGISTSLGLTAKPIVNFSGVVGNNLVTLGTDVSFDTASGNLTKYNAGLSLTHSDLIASLSLNDKGDTLIASYHQNVNILTNTAVAAEFSHSFSSHENKLTIGTQHALDPLTLIKARVNNHGRATAHIQHDLSIRTRFSITAEVDTGAIDKSAKIGLALALKP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01760 276 Gene3D Porin 1 275 IPR023614 -
Aip05g01760 276 PANTHER MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 3 1 276 - -
Aip05g01760 276 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 276 IPR001925 GO:0005741|GO:0008308|GO:0098656
Aip05g01760 276 Pfam Eukaryotic porin 4 269 IPR027246 GO:0005741|GO:0055085
Aip05g01760 276 ProSitePatterns Eukaryotic mitochondrial porin signature. 219 241 IPR001925 GO:0005741|GO:0008308|GO:0098656
Aip05g01760 276 CDD Porin3_VDAC 5 275 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01760 Aip-Chr5 36241273 36243996 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01760 K15040 - gmx:100787662 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01760 05 36241273 36243996 Aip01g01504 01 50522722 50525378 PCT