Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01743 ATGTTGGTTTCGGAGTTTTCTGAGTTTCATCTCAGCTCTCAGCTCTCAGCTCTCAGAGCCATGGGTTTGGGTGCTGAGAATGGTAAGGTGGTAGATTCTTGGGATGTGTGTAAATCAAAGGGGAAGAAGAAGAGTAAGAAATTGAAGCAGAAGGAAGGGGAGGTAGTGGTGGATGAGGAAGATGAGGAGTTTGAGGGAGAGACTGGGTGTTGGGTTAGGCTAAGGTTCATGGGGAGCTGCATTTCTTCAAGACCCAAAGTTGATAACTCAGTCAGTGGCACCACCACTCATGATGCTGAAAGTAAATCAACTAGTGATACAAGTAGAGACCAACGAAGCGAACCGACGGCCCCAGTAGTCTCATCTACGACCACTAGCAATGCAAGCAGTTCATCAACTTCTAAACTCGAAGAGGAGCTTAAAGTTGCCTCCAGGCTACGGAAGTTCTCTTTCAATGATCTTAAGTTGGCAACGAGAAATTTTCGGCCCGAGAGTCTTCTTGGCGAAGGTGGGTTTGGTTGCGTATTCAAGGGATGGGTTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACCGTTGCCGTAAAAACCCTCAACCATGATGGGCTCCAAGGCCATAAAGAATGGCTGGCTGAAGTAAACTTTCTTGGTGATCTAGTCCATCCACACCTTGTTAAGCTTATAGGGTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTCGGGGAAGCCTAGAAAATCACTTATTTAGGAGATCCATGCCTCTTCCATGGTCCGAATACAACGCCAAGCTCTCAGACTTTGGACTTGCCAAAGATGGTCCAGAAGGAGATAAAACCCATGTGTCTACCCGAGTGATGGGAACCTATGGTTATGCAGCACCGGAGTATGTCATGACAGGTCATCTTACATCAAGAAGTGACGTGTATAGTTTTGGAGTGGTACTACTTGAGATGTTGACCGGAAGAAGATCTATGGACAAACACCGTCCCAATGGCGAACATAACCTTGTGGAATGGGCTCGGCCGCATCTGGGAGAGAAGAGAAGGTTCTATAGGCTGTTGGACCCTCGCCTTGAAGGCCATTTCTCCATAAAAGGAGCTCAAAAAGCTGCCCAAATTGCCGCTCGCTGTCTTAGTAGAGATCCAAAAGCCAGACCCCTAATGAGTGAAGTTGTAGAAGATCTAAAGCCTCTGCTAAGTCTTAGGGACATGGCAAGCTCTTCATATTACTTCCAATCGATGCAAGCTGACCGCTTTAGCCCTAGTCCAAATACCCGAAATGGGCGGACACAAGGAGTGTTCCTCGCCCGGAATGCGCAGAGGAGTCTTTCAATACCCCATGGTATCCATGCCTCTCCATATCACCATCAGTTTCTGCAACAATCACCAAAACCTAATGGCAAAACATAA 1434 0.4707 MLVSEFSEFHLSSQLSALRAMGLGAENGKVVDSWDVCKSKGKKKSKKLKQKEGEVVVDEEDEEFEGETGCWVRLRFMGSCISSRPKVDNSVSGTTTHDAESKSTSDTSRDQRSEPTAPVVSSTTTSNASSSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPHLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSMPLPWSEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGEKRRFYRLLDPRLEGHFSIKGAQKAAQIAARCLSRDPKARPLMSEVVEDLKPLLSLRDMASSSYYFQSMQADRFSPSPNTRNGRTQGVFLARNAQRSLSIPHGIHASPYHHQFLQQSPKPNGKT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01743 477 Gene3D Phosphorylase Kinase; domain 1 120 246 - -
Aip05g01743 477 Gene3D Transferase(Phosphotransferase) domain 1 252 422 - -
Aip05g01743 477 Pfam Protein tyrosine and serine/threonine kinase 165 261 IPR001245 GO:0004672|GO:0006468
Aip05g01743 477 MobiDBLite consensus disorder prediction 110 136 - -
Aip05g01743 477 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 93 266 - -
Aip05g01743 477 ProSitePatterns Protein kinases ATP-binding region signature. 167 199 IPR017441 GO:0005524
Aip05g01743 477 PANTHER OS01G0588500 PROTEIN-RELATED 267 467 - -
Aip05g01743 477 Pfam Protein kinase domain 269 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01743 477 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 267 467 - -
Aip05g01743 477 MobiDBLite consensus disorder prediction 85 136 - -
Aip05g01743 477 SUPERFAMILY Protein kinase-like (PK-like) 147 428 IPR011009 -
Aip05g01743 477 PANTHER OS01G0588500 PROTEIN-RELATED 93 266 - -
Aip05g01743 477 ProSiteProfiles Protein kinase domain profile. 161 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01743 477 MobiDBLite consensus disorder prediction 85 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01743 Aip-Chr5 35268427 35272129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01743 147 403 Glycoside Hydrolase AT3G07070 51.007 3.10e-91 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip05g01743 Pkinase 1.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01743 - - gmx:100787151 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01743 05 35268427 35272129 Aip05g01743 05 35268427 35272129 ECH