Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01737 ATGGAGTCATCATCATCAACATCATCATCATCGACAAGAAGAACAACATCAACCGAAATAACATCAACATCGTTGATGGCGATACAGAATTCCTTCGACTCCGTTTATTCCCGCTACGCACGAGAGGCGCTCGACGAATTGCCTGGTAACTTCACCATCACCGACCCATCAATCCCAGGCCACCCAATCATCTTTGCCAGCCAAGGCTTCCTCAAGATGACCGGTTACGACCGAGACGAGGTTGTCGGAAGAGGTGGGGCCATGTTCCAAGGTGATAGAACTTCTAGAAGGTCGGTGATGGAGGTCAGGGAGGCCGTTAGGAATGACCGGAGCTGCCAGGTCAGCTTGCTTAACTACCGCAAGGATGGGACACCCTTTTGGATGCTCTTTCATGTGAGTCCTGTTTTTGGAAGGGATGGTGGCCGGGTTGTTCACTTTGTGGCGGTTCAGGTTCCTTTGGAAGGGAGAAGGCTGAGGAGGCGACGGTCTATTGGGTGCCGGAGAGGTAGCGCCGATGACGGTGGTAGTGGCGATTATGTTCTCGGGTGTTGTAGGAAGGAGGTGTGCAATGATAACAGCTTGGAGGTTGAGTTAGTTTCTTCCATGGATCACGGGTTGGACCATGATACTAGAGAATTGGACAGTGACAAGCCGTGTGAGGCAACTGACGACGAGAAGAGAAGCGCGATGGTTGCAATGGACAACATTTTTTCTGTGCTAACTCACTACAGCGAGTCAACAGGCAGATTGGTATGTAGAAAGAGATGCAGCATACCTGACATGGGTCTTCTTAGCACTTCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTGTGA 846 0.4965 MESSSSTSSSSTRRTTSTEITSTSLMAIQNSFDSVYSRYAREALDELPGNFTITDPSIPGHPIIFASQGFLKMTGYDRDEVVGRGGAMFQGDRTSRRSVMEVREAVRNDRSCQVSLLNYRKDGTPFWMLFHVSPVFGRDGGRVVHFVAVQVPLEGRRLRRRRSIGCRRGSADDGGSGDYVLGCCRKEVCNDNSLEVELVSSMDHGLDHDTRELDSDKPCEATDDEKRSAMVAMDNIFSVLTHYSESTGRLVCRKRCSIPDMGLLSTSLIISLGRIKQSFVL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01737 281 SUPERFAMILY PYP-like sensor domain (PAS domain) 53 149 IPR035965 -
Aip05g01737 281 ProSiteProfiles PAS repeat profile. 36 84 IPR000014 -
Aip05g01737 281 CDD PAS 63 150 IPR000014 -
Aip05g01737 281 TIGRFAM sensory_box: PAS domain S-box protein 63 146 IPR000014 -
Aip05g01737 281 PANTHER PROTEIN TWIN LOV 1 27 281 - -
Aip05g01737 281 Gene3D PAS domain 50 170 - -
Aip05g01737 281 SMART pac_2 113 156 IPR001610 -
Aip05g01737 281 MobiDBLite consensus disorder prediction 1 22 - -
Aip05g01737 281 Pfam PAS domain 60 150 IPR000014 -
Aip05g01737 281 ProSiteProfiles PAC domain profile. 110 165 IPR000700 -
Aip05g01737 281 PANTHER PROTEIN TWIN LOV 1-LIKE 27 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01737 Aip-Chr5 34982635 34987138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01737 44 156 AGC Kinase Gene Family AT5G58140 41.322 6.45e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01737 - - adu:107489171 506.138