Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01719 ATGATTCAACCTCAAACCCATTTGAATGTAGCCGATAACAGCGGAGCCCGCCAATTGATGTGTATTCGAATCATAGGAGCAGGTAATCGACGATATGCTTCTATTGGTGACATTGTTGTTGCTGTAATCAAGGAAGCGGTACCAAATATGTCTTTAGAAAGATCAGAAGTGATTAGAGCTGTAATTGTACGTACTTGTAAAGAACTTAAACGTAGCAATGGCATGATAATACAGTATGATGATAATGCCGCGGTTGTCATTGATCAAGAGGGAAATCCAAAAGGAACTCGAATTTTTGGCGCAATCGCCCGGGAATTGAGACA 323 0.4087 MIQPQTHLNVADNSGARQLMCIRIIGAGNRRYASIGDIVVAVIKEAVPNMSLERSEVIRAVIVRTCKELKRSNGMIIQYDDNAAVVIDQEGNPKGTRIFGAIARELR 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01719 107 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 107 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip05g01719 107 SUPERFAMILY Ribosomal protein L14 1 107 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aip05g01719 107 Gene3D Ribosomal protein L14 1 107 IPR036853 GO:0003735|GO:0005840|GO:0006412
Aip05g01719 107 Pfam Ribosomal protein L14p/L23e 1 107 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip05g01719 107 ProSitePatterns Ribosomal protein L14 signature. 60 86 IPR019972 -
Aip05g01719 107 TIGRFAM rplN_bact: ribosomal protein uL14 1 107 IPR005745 GO:0003735|GO:0006412|GO:0015934
Aip05g01719 107 SMART Ribosomal_L14_2 1 107 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip05g01719 107 Hamap 50S ribosomal protein L14 [rplN]. 1 107 IPR000218 GO:0003735|GO:0005840|GO:0006412
Aip05g01719 107 PANTHER RIBOSOMAL PROTEIN L14B/L23E-RELATED 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01719 Aip-Chr5 33666280 33666602 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01719 8 105 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 37.255 2.61e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01719 K02874 - csin:14412462 199.134