Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01718 ATGGCAAAATCTATACCCAAAATTGGTTCGCGTAAAAATGGACGTATTGGTTCACGTAAACATGCTCGTAAAATACCAAAGGGCGTTATTCATGTTCAAGCTAGTTTCAACAATACCATTGTCACTGTTACCGATGTACGGGGTCGGGTAATTTCGTGGTCCTCCGCAGGTACTTGTGGATTCAAAGGTATGCGAAGGGGAACACCATTTGTCACCCAAACCGCAGCAGGAAATGTTATTCGAACAGTAGCGAATCAAGGCATGCAACGAGCAGAAGTCATGATAAAGGGTCCCGGTCTCGGAAGAGATGCGGCATTAAGAGCTATTCGTAGAAGTGGCATACCATAG 348 0.4511 MAKSIPKIGSRKNGRIGSRKHARKIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFKGMRRGTPFVTQTAAGNVIRTVANQGMQRAEVMIKGPGLGRDAALRAIRRSGIP 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01718 115 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 6 115 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aip05g01718 115 Pfam Ribosomal protein S11 28 114 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aip05g01718 115 Hamap 30S ribosomal protein S11 [rpsK]. 11 115 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aip05g01718 115 Gene3D Ribosomal protein S11 12 115 IPR036967 GO:0003735|GO:0005840|GO:0006412
Aip05g01718 115 SUPERFAMILY Translational machinery components 23 114 - -
Aip05g01718 115 MobiDBLite consensus disorder prediction 1 23 - -
Aip05g01718 115 PANTHER 30S RIBOSOMAL PROTEIN S11, CHLOROPLASTIC 1 114 - -
Aip05g01718 115 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 1 114 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01718 Aip-Chr5 33663956 33664303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01718 28 114 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 35.417 4.46e-09 49.3