Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01714 ATGCACTCCCTCACCACCGCACCCTCTTTTTCTTCCCTTTCTTTCCATTTCTTTCCCCACCGCCACCGCCACACCCTCTTTCAGTTAACTCCTCCCTTCATCTTCTCCTTCCGGTACACCACCGCCAAGAGGCTCCAGGTGCAGCTCCACGTGGAGGAGGAGAAATCACTGAGGAAGAAAAAAGGGAGGAAGGGTCTTTGCTGCAAGGAGGACTTGGGTGGGGCCGAAGAGGAAGTGTTCTCTCCGCTGGAAGCGGAGATTCTTGAGTTCATGCGGAGCTCCAAGAAACCATCAGCATTTCCGACGAGGGAGGAGCTGGTGGCTTCTGGGAGGGTTGATTTGGTTGATGCCATTGTTACCAAAGAATGCTATCTTGTTTATGGCTGGGATTTGGATCGTGGGTCACGTGAAAGTTACGATTTTGATGGTGCTTCTGTTGCTGAGATTCATGGTCAAGCATCAAGGGCTTCTGGGTTTTCTTCCTCTTCTGATGACGATAACTCTTGCCAGCAAGCCAAATCAATGGATATCGAAGTTGAGGAGTCAGGCATTGAGGGTATATTGAATCGGCTGGAGAGACAGAGAAGTAATTCCTTTGGACTTGGGTTAACAGAGAAAGATGAAAGTGATCCTTCCAGAAACAGTGAAGATAAAAATACAGTAAGTACTCTTCATGGTGGTTTGATCAAACATGATCAGCACAGATCTCAATTAGGCAGTGAAAATTTAAGAAACTCCCTTGAGCCTGACACATGGAGAAGTTGGATTATCCAGAGGAATGGTTCTTCAAATGTAGATTTTGAAGCTGCTGAAATTGTTCCTAGTGAAATTAGGGAGTCTTCTGCTGAACCTGCAAATAGAGAAGCAGGGTTCAGTTCTCTTGATGGGGATGCAAATCACAAGGATATCAAATCCCGTATCCGGAATCTGGAATCAGAGCTATCCTCTGCACTTCATTCGTTGAGATCTAAAGCTGATTATGTTACAATGCAGATGGATCAGAAGAACTCATCAGATGATCTAGCAAAGTATTCCGATGCTTGGGAATTCCAAGAAACTGAGATAATGAATGCTCAGGACAGGCTGCGCTCCATACGTGCTAAGTTGTCAGTATTAGAAGGAAAGATGTCATTGGCAATAATGGATGCACACAAAATTGTTGAAGAGAAGCAGAAGAGGATTAATAATGCTCACAGAGCCTTGCAAATTCTGAAGATGATTTGTGTAGTTTGGCATAATCCAGCTTCACAAGTATATTTAGTAGGATCCTTTGATGGTTGGTCCACCCAGAGAAAAATGGAGAAATCAAATACTGGCATGTTTTCTTTGAACTTGCAGCTATATCCTGGAAAATACGAGATCAAATTCATTGTTGATGGTGAATGGAAAGTTGATCCACTGCGGCCTATTGTTGTTACCGACAAAGGTTATGAGAACAATCTCCTCGTGGTTCCTGATTAG 1461 0.4408 MHSLTTAPSFSSLSFHFFPHRHRHTLFQLTPPFIFSFRYTTAKRLQVQLHVEEEKSLRKKKGRKGLCCKEDLGGAEEEVFSPLEAEILEFMRSSKKPSAFPTREELVASGRVDLVDAIVTKECYLVYGWDLDRGSRESYDFDGASVAEIHGQASRASGFSSSSDDDNSCQQAKSMDIEVEESGIEGILNRLERQRSNSFGLGLTEKDESDPSRNSEDKNTVSTLHGGLIKHDQHRSQLGSENLRNSLEPDTWRSWIIQRNGSSNVDFEAAEIVPSEIRESSAEPANREAGFSSLDGDANHKDIKSRIRNLESELSSALHSLRSKADYVTMQMDQKNSSDDLAKYSDAWEFQETEIMNAQDRLRSIRAKLSVLEGKMSLAIMDAHKIVEEKQKRINNAHRALQILKMICVVWHNPASQVYLVGSFDGWSTQRKMEKSNTGMFSLNLQLYPGKYEIKFIVDGEWKVDPLRPIVVTDKGYENNLLVVPD 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01714 486 CDD E_set_AMPKbeta_like_N 406 484 - -
Aip05g01714 486 Pfam Glycogen recognition site of AMP-activated protein kinase 409 484 IPR032640 -
Aip05g01714 486 Coils Coil 355 375 - -
Aip05g01714 486 MobiDBLite consensus disorder prediction 199 221 - -
Aip05g01714 486 MobiDBLite consensus disorder prediction 277 298 - -
Aip05g01714 486 Gene3D Immunoglobulins 400 486 IPR013783 -
Aip05g01714 486 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 1 484 - -
Aip05g01714 486 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 1 484 - -
Aip05g01714 486 SUPERFAMILY E set domains 406 485 IPR014756 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01714 407 486 Protein tyrosine phosphatase (PTP) family AT3G01510 32.927 2.48e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01714 - - ahf:112797483 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01714 05 32997049 33002380 Aip05g01714 05 32997049 33002380 ECH