Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01708 ATGGAAGCAAAAAGTAGTGACTTGAAGCTTTTGGGTGGATGGTTCAGTCCGTTTGTCACAAGGGTGAAGATTGCACTTAACATTAAAGGATTGGAATATGAGAACATTGAAGAGGATTTGAATTCCAAAAGTGATCTTCTTCTTCGTTCCAATCCTGTGCACAAGAAAATCCCAGTTCTAATCCACGGTGACAAACCCATATGTGAATCCTCAATCATACTTCAATATATTGATGAGGTTTGGTCCAATGCTCCTTCTATCCTTCCTCCAGATGCATATGACAGAGCAATTGCTAGATTCTGGGTTTCATACATTGATGATAAGCCACATTTCGAGCAATTGGAGGAAGAAATACTTGTGAAGTTGGAAGAGGCATTCGGAAAATGCAGTGAAGAAAAGCCCTTCTTTGGAGGGAGCAAGGTTGGACTCACTGACATTGCCTTTGGGAGCTTCTTGCCTTCTCTACGTGTGTTAGAAGAGATGAATGGAAAGAAGGTCCTTGCCAATGACAAGTTTCCAGGGTTGGTGAATTGGGCTACGAATTTTATTGTGAATTCAGCTGTGACTAGAATTCTTCCAGAGATTGACAAGCTTGCTTTGTTTTGTATGGATCTTCGACAAAAATGGGTTACTGCTAAAGCTACTGCCAAGTAA 654 0.4098 MEAKSSDLKLLGGWFSPFVTRVKIALNIKGLEYENIEEDLNSKSDLLLRSNPVHKKIPVLIHGDKPICESSIILQYIDEVWSNAPSILPPDAYDRAIARFWVSYIDDKPHFEQLEEEILVKLEEAFGKCSEEKPFFGGSKVGLTDIAFGSFLPSLRVLEEMNGKKVLANDKFPGLVNWATNFIVNSAVTRILPEIDKLALFCMDLRQKWVTAKATAK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01708 217 CDD GST_N_Tau 8 81 - -
Aip05g01708 217 Gene3D Glutaredoxin 1 87 - -
Aip05g01708 217 SUPERFAMILY Thioredoxin-like 7 108 IPR036249 -
Aip05g01708 217 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Aip05g01708 217 SFLD Glutathione Transferase (cytosolic) 4 213 IPR040079 -
Aip05g01708 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Aip05g01708 217 CDD GST_C_Tau 92 201 IPR045074 GO:0004364|GO:0006749
Aip05g01708 217 SFLD Main.3: Omega- and Tau-like 4 213 IPR045073 -
Aip05g01708 217 Pfam Glutathione S-transferase, C-terminal domain 98 182 IPR004046 -
Aip05g01708 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 202 IPR045073 -
Aip05g01708 217 SUPERFAMILY GST C-terminal domain-like 79 208 IPR036282 -
Aip05g01708 217 PANTHER GLUTATHIONE S-TRANSFERASE U17 7 202 - -
Aip05g01708 217 Gene3D - 88 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01708 Aip-Chr5 32291705 32293413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01708 5 205 Glutathione S-transferase Gene Family AT1G10360 50.455 6.49e-68 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01708 K00799 - gmx:547576 268.47