Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01701 ATGGTTGGTGGTCTAGCGAGATCACCGGCAGGCTTGGGCCTCACTATTACTATGTTTATTTCTGTACAACCAACGAAGAGATCACTTATCCTTCTAATAAGATCAGGGTTCATCATGAGTGGGTTAACAGTGATTGGATTCTCTCCCAAAGAGATCCTTACCCCTGCGTCAATCTTCACTCCTCACTCACTACCGACTCCGCCGCATACTTCGTTGTCGGGCAGCTGTTATCCGTCGTATTCACCGGCGGAGCAACCACTGAATCCATCCTCCGCTTTAGCTCCTTCCAGATATTTCAGCATCAAATATTGTCAAGTTCTTCACTTAACTGAAGTTTCCATCGAAAAAGCCAAGATGTCGAGGAAGGGTTTGATGGAACAGGACCTGAGTAAGTTGGACGTGACAAAATTGCATCCACTTTCTCCGGAAGTCATATCTCGGCAGGCTACAATTAATATTGGCACCATAGGGCATGTGGCACATGGCAAATCAACTGTTGTGAAAGCAATATCAGGTGTTCAGACCGTGCGTTTTAAAAATGAGTTGGAGAGAAACATCACAATCAAGCTTGGCTATGCAAATGCAAAGATATATAAGTGTGAAGATGATAGGTGTCCAAGGCCTATGTGCTACAAGGCTTATGGAAGTGGAAAGGAAGATAGTCCAATGTGTGATGTGCCAGGGTTTGAAAACTCCAAGATGAAGTTGCTGAGACATGTTTCTTTTGTGGATTGCCCAGGACATGATATTCTTATGGCCACAATGCTTAATGGAGCTGCAATCATGGATGGAGCTTTACTACTCATAGCTGCTAATGAGAGTTGCCCGCAACCACAAACCTCTGAACATTTAGCTGCTGTGGAAATTATGCGTCTACAGCACATAATAATTCTTCAGAACAAGGTTGATCTGATTCAAGAGAATGTGGCAATGAATCAGCATGATACAATTAAAAAGTTCATTGAAGGAACTGTAGCTGATAGTGCACCAGTGGTACCTATTTCAGCACAACTGAAGTATAATATTGATGTTGTGTGTGAGTATATTGTGAAAAAGATCCCAATCCCAGAAAGGAATTTTACTTCTCCACCCAATATGATTGTTATTCGGTCATTTGACGTTAATAAACCTGGGTTCGAGGTTGACGAAATAAAAGGAGGTGTAGCTGGTGGAAGTATCCTGAGGGGCGTTTTGAGGGTCAACCAATTCATTGAAGTTCGACCTGGGATAGTTGTGAAAGATGAGAGTGGAAATATCAGATGCACACCCATATACTCTAGAATAGTTTCATTATTTGCCGAGCAAAATGAGCTTCAATTTGCTGTGCCAGGAGGTTTAATTGGTGTTGGAACAACAATGGATCCCACTTTGACCCGTGCTGACAGGTTGGTCGGGCAAGTTCTAGGAGAGGTTGGATCACTGCCGGAGGTCTTTGTTGAACTTGAGGTAAATTTCTTCTTGCTTCGACGGCTTCTTGGTGTTCGAACCAAGGGCTCAGAGAGACAGGGAAAGGTATCTAAGCTGGCTAAAGCAGAGATGCTAATGTTGAACATAGGATCAATGTCGACGGGTGCGAGAGTTGTTGCCGTGAAGAATGATCTGGCGAAGTTGCAACTTACCTCCCCTGTGTGCACTAACAAGGGTGAGAAGATCGCACTTAGCCGACGTGTTGAGAAGCATTGGCGTCTAATCGGGTGGGGTCAAATCCAAGCGGGAATCACTCTTGACGTCCCTGCCGCCCCAACTGAGTTGAAGTGA 1758 0.4443 MVGGLARSPAGLGLTITMFISVQPTKRSLILLIRSGFIMSGLTVIGFSPKEILTPASIFTPHSLPTPPHTSLSGSCYPSYSPAEQPLNPSSALAPSRYFSIKYCQVLHLTEVSIEKAKMSRKGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDSPMCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAMNQHDTIKKFIEGTVADSAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFTSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLRVNQFIEVRPGIVVKDESGNIRCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKAEMLMLNIGSMSTGARVVAVKNDLAKLQLTSPVCTNKGEKIALSRRVEKHWRLIGWGQIQAGITLDVPAAPTELK 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01701 585 SUPERFAMILY Translation proteins 358 472 IPR009000 -
Aip05g01701 585 CDD eIF2_gamma 151 358 IPR044128 GO:0005525
Aip05g01701 585 CDD eIF2_gamma_II 359 472 IPR044127 GO:0000049
Aip05g01701 585 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 119 581 - -
Aip05g01701 585 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 473 570 IPR009001 -
Aip05g01701 585 Pfam Initiation factor eIF2 gamma, C terminal 480 569 IPR015256 -
Aip05g01701 585 PRINTS GTP-binding elongation factor signature 295 304 IPR000795 GO:0003924|GO:0005525
Aip05g01701 585 PRINTS GTP-binding elongation factor signature 152 165 IPR000795 GO:0003924|GO:0005525
Aip05g01701 585 PRINTS GTP-binding elongation factor signature 241 251 IPR000795 GO:0003924|GO:0005525
Aip05g01701 585 PRINTS GTP-binding elongation factor signature 257 268 IPR000795 GO:0003924|GO:0005525
Aip05g01701 585 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 119 581 - -
Aip05g01701 585 Pfam Elongation factor Tu GTP binding domain 150 354 IPR000795 GO:0003924|GO:0005525
Aip05g01701 585 CDD eIF2_gamma_III 475 569 IPR015256 -
Aip05g01701 585 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 148 357 IPR000795 GO:0003924|GO:0005525
Aip05g01701 585 Pfam Elongation factor Tu domain 2 386 468 IPR004161 GO:0005525
Aip05g01701 585 Gene3D Translation factors 359 474 - -
Aip05g01701 585 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 364 IPR027417 -
Aip05g01701 585 Gene3D - 148 358 IPR027417 -
Aip05g01701 585 Gene3D Translation factors 475 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01701 Aip-Chr5 32048544 32057150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01701 119 581 Eukaryotic Initiation Factors Gene Family AT1G04170 89.655 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01701 K03242 - gmx:100784099 891.723