Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01683 ATGCCCTGTTGCATCGATGGAGGGCGAAGCATTGACGAAGACGTTATCCCCAAAAAGGAAGCCCTAGGGTCGAGGGACAGGAATAGGGCCGATGAAGGTGTTGGCGTCGTGGAGGTTGAAGCCGGGAAACAGGCTACAGTCGACGTTGAAGACAAGGTTGAAAGAGAGCAAGTATTGAGGGAACGCTCAGTCATTGATACTTATTCATGGTCACTACACCCTGTTCCAAGATTGGATACGACGATATGCTGGTTTAACTATTTACATATGCTTAGTCCTGTGAGTTTGAAGATGGATCCGAGCTTTCAACTTAGTGGTGGTGAGGATGACAAAGATTGGCAAAGTGAAGAAGAGTATTTCGGTGTCTCTAGTTTGAGTGGGGAGGACGACAACTACTCCTTTGGGAATGACTCTGAGGCAGGCAAAACGACTGACGACGTGCACAGGAACGGCCTTGGTGCAGACCCAGTGATAAGTGAGAGGGATGCTCCAGGTTTCAGGTCCGCAGAGGATTTTGTGTACCAAGTGTTTAAGACCGAGGAAGAGGCTTATGCGGCTTACAAACAGTTTGCCCGGCTAAGAGGGTTCGGTGTAAGGAAGGGTGACGTGGGTCGAATAAACGGTGTCTTGGTACGGCGAGACTTTTTTTGCCATTGGCAAGGTACAAGGCATGAAAAACACTACGATCATCCAGAAAGAGTCCGGGAGGAGAAGTTGGAGAGTCGCACGGGTTGTATGAAAAAGCTGAAAATTTGCTTTGATGCGCAAGACATGTTTGGAAAGTCAGGAGGATCAACGACAGCCATAACCACCCTCTTGCTGCAACTATGTTTAATCATCTTCTCCCTGGTCATCGGAATTTGA 864 0.4826 MPCCIDGGRSIDEDVIPKKEALGSRDRNRADEGVGVVEVEAGKQATVDVEDKVEREQVLRERSVIDTYSWSLHPVPRLDTTICWFNYLHMLSPVSLKMDPSFQLSGGEDDKDWQSEEEYFGVSSLSGEDDNYSFGNDSEAGKTTDDVHRNGLGADPVISERDAPGFRSAEDFVYQVFKTEEEAYAAYKQFARLRGFGVRKGDVGRINGVLVRRDFFCHWQGTRHEKHYDHPERVREEKLESRTGCMKKLKICFDAQDMFGKSGGSTTAITTLLLQLCLIIFSLVIGI 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01683 287 Pfam FAR1 DNA-binding domain 187 252 IPR004330 -
Aip05g01683 287 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 167 253 IPR031052 GO:0006355
Aip05g01683 287 MobiDBLite consensus disorder prediction 135 154 - -
Aip05g01683 287 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 167 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01683 Aip-Chr5 31388394 31390805 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g01683 FAR1 5.3e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01683 - - ahf:112709419 247.669