Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01671 AAAAAATATTAACTTACTTTATTGTGGCTTTACATGTGAATTTAGGGGCATACGATACAGAAAAAGCTGCTGCTCGCTCTTATGATCTTGCAGCTCTAAAGTATTGGGGATCTAATACAATCTTGAATTTTTCGATAGAAACATATGCCAAGGAAATTGAGGAAATGAAGGATATTTCACAAACTGAATACTTGGCTTCTCTGCGAAGAAGGAGCAGTGGATTTTCGAGAGGTGTTTCCAAGTATCGTGGAGTGGCGAGTAGGCATCACCACAATGGAAGGTGGGAAGCACGAATTGGAAGAGTAAATGGCAACAAGTACCTTTATCTGGGGACCTATAACACTCAAGAAGAGGCAGCAGCAGCATATGATAAAGCAGCCATAAAGTATAGAGGAATAAATGCAGTAACAAACTTTGACATAAGCAATTATATTGACAAAATAAAGAAGAATGAGCCGTCTATGAAAAAAGCACAAACACAAATAACTCCAATCTCTACTGAATTTGAAGAAGCAGAAGTAGTGGAGCAAGAGGCTCCTTCCACAGTAGTGGCACATCCAGCAAATTTAGAAAATATGCAAAAGGAAAGAGAGCAGCCAAACACGGACATCAACGGCATGCTTTCCCGGGATTTGAGATGGAGTTTCATGGATGCTGAGCTGTCCGAGTTCAACGTAAATGACATTTTTCAAGGTAAAGGTAGTGGGTTGGAGGATGATATCAACTTTCTGTGTATGGCTGATCCTGATGAGAATAGTTTCAATCTGAACACTATCTTTGACGGTCTTGAAAAATGTGATGGAGATATGCATGTGCATGCCAATTATTAA 830 0.3952 KILTYFIVALHVNLGAYDTEKAAARSYDLAALKYWGSNTILNFSIETYAKEIEEMKDISQTEYLASLRRRSSGFSRGVSKYRGVASRHHHNGRWEARIGRVNGNKYLYLGTYNTQEEAAAAYDKAAIKYRGINAVTNFDISNYIDKIKKNEPSMKKAQTQITPISTEFEEAEVVEQEAPSTVVAHPANLENMQKEREQPNTDINGMLSRDLRWSFMDAELSEFNVNDIFQGKGSGLEDDINFLCMADPDENSFNLNTIFDGLEKCDGDMHVHANY 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01671 275 Pfam AP2 domain 79 131 IPR001471 GO:0003700|GO:0006355
Aip05g01671 275 ProSiteProfiles AP2/ERF domain profile. 80 139 IPR001471 GO:0003700|GO:0006355
Aip05g01671 275 ProSiteProfiles AP2/ERF domain profile. 1 44 IPR001471 GO:0003700|GO:0006355
Aip05g01671 275 PRINTS Ethylene responsive element binding protein signature 121 141 IPR001471 GO:0003700|GO:0006355
Aip05g01671 275 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Aip05g01671 275 SUPERFAMILY DNA-binding domain 79 141 IPR016177 GO:0003677
Aip05g01671 275 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 13 210 - -
Aip05g01671 275 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 210 - -
Aip05g01671 275 CDD AP2 79 141 IPR001471 GO:0003700|GO:0006355
Aip05g01671 275 Gene3D AP2/ERF domain 9 46 IPR036955 GO:0003700|GO:0006355
Aip05g01671 275 Gene3D AP2/ERF domain 79 141 IPR036955 GO:0003700|GO:0006355
Aip05g01671 275 SMART rav1_2 80 145 IPR001471 GO:0003700|GO:0006355
Aip05g01671 275 SMART rav1_2 11 50 IPR001471 GO:0003700|GO:0006355
Aip05g01671 275 SUPERFAMILY DNA-binding domain 11 45 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01671 Aip-Chr5 31016949 31024561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01671 6 149 AP2-EREBP Transcription Factor Family AT3G54320 79.167 6.20e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip05g01671 AP2 1.6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01671 - - adu:107463124 454.907