LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip05g01664	ATGGTAAGGGATATGAATGAAGAGCATGGGTGTAATGAGGATTTTGACGATGCATGTGATGTCGGGGCCACAGACATTGTATCTGATGAGGATACATCAGACTACGGTAACGTTATCGGATTGAGTGACCAGCAAATAATGAGAAAGGTGTTTCAGAGTAAGGAATTTGCTTATGAATTTTATTGTAAATTTGGGAGATGCCAAGGATTCGGTGTGCGCAAGGGAGATTATGGCAAGGATGATGATGGAAATTTGATACGAAGAAGGTTCTTTTGCAATAGGGCAGGATTGAGGGATGAAAAATACCTTCATAGATTGGATAGACAAAGGGGTCACCGACCTGAAACACGGACTAATTGTATGGCGAAGTTGTCGATTTACCTAGATAGGGAAAACTCAGTATGGAAGGTTCGGAAAGTTATCTTGGATCATCATCATAAGTTGACACCGCAAGTAATGGTGCACATGATTCCAAAATTTCGTCAGATGTCAGATGTTGCAAAGGCATACATAGACGGCATGCATGGGTATGGGGTACCTACGTCTAAGATTCTCAACTACATGGCTGGAATTGTCAGAGGGTATTCTTTGTTGGGCTTTACGAAAAAAGATGCATATAACTACATCGACAAGATACGTCGTTCAAAGATTGCTGATGGTGACTCAAATGCTGCCATTGTATACCTAGAGAGAAAGGCGGCAGCCGATCCAATGGCGATGGCTAGGTATAACTTAACAGAGGATAGTATGTTAGCGAATATGTTCTGGGTGGATGGAATTAGTAGAGTCGAATACCAGTACTTCAGAGACATTGTTGCTTTCGACTCGATATACAAAAAGAATAAATACAATAGACCTTTGGTGATATTCTCCGGCTCAAACTACAAGCAAACTACGATATTTGGTTTTGGATTGGTTCTAAATGAAACTATTACATCATACACATAG	948	0.4061	MVRDMNEEHGCNEDFDDACDVGATDIVSDEDTSDYGNVIGLSDQQIMRKVFQSKEFAYEFYCKFGRCQGFGVRKGDYGKDDDGNLIRRRFFCNRAGLRDEKYLHRLDRQRGHRPETRTNCMAKLSIYLDRENSVWKVRKVILDHHHKLTPQVMVHMIPKFRQMSDVAKAYIDGMHGYGVPTSKILNYMAGIVRGYSLLGFTKKDAYNYIDKIRRSKIADGDSNAAIVYLERKAAADPMAMARYNLTEDSMLANMFWVDGISRVEYQYFRDIVAFDSIYKKNKYNRPLVIFSGSNYKQTTIFGFGLVLNETITSYT	315

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip05g01664	315	Pfam	FAR1 DNA-binding domain	59	149	IPR004330	-
	Aip05g01664	315	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	45	314	IPR031052	GO:0006355
	Aip05g01664	315	PANTHER	OS02G0262500 PROTEIN	45	314	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip05g01664	Aip-Chr5	30787863	30788810	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Aip05g01664		FAR1	3.8e-17	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip05g01664	-		-	ahf:112701370	441.039