Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01659 ATGTTGAATCATGATAACATAATTATTTTTAATGTTTTGTTAATTAGATATGAAGCACAGCTCATCGATGAAATTGTTGAAGAAGCATGGACAAAAATAGAATCTAGATTGCCAACACAAGATGATAATAATGATGACGATGATGATGATCTAATTGCGATTAATGCAAAAGTAAATGAAGTATGTTCATGTTTAAGCCCAGAGTCAACAGATGTGCTCTTCATTGGAATATGGGGTATGGGTGGGTCAGGAAAAACTACTCTTACCTCTACTGTTTGCAAGAAAATCCGAAGCCAATTTGAAGAACACTGCATTCTTCGCGTTGGAGAGGTTTCGAGAGAAGGAGATCAAGATCTAGTTAACCTGCAAAATCAACTTCTTTCACATTTGAAACCAAAGTGCATGGTAATTAAAACTTTGAACCAAGGAAAGGATGCCATCAAAAACCTTTTGTACAAAAagaaagttctcattgtccttgatgatgtgagaactacaagacagctagagaatttggcaggaagccgcgtttggtttggtccggggagtagaataatagttactactagggaccaacacttgcttagttcacatggagtaacactgtttaaattgtatgagatgaaagccttggatactaatgaatcccttcagctattccataaagaagcatttaaaggagagaaaaaacaagaagagtatttggatttgtctagaaagttcgtagaatatgctggaggccttcctttggcacttaaagtgctaggttccaatctttgtacaagaaacattgatgaatgggatgaggctttcgataagatgagaaaagatcaagatggtggtattatgaacatacttaggatatgctatgatatgttggaagaaggtcacaagactatatttcttgacattgcatgtttctttaaagggtggtacaaagataaagtgataagaatattgaaaaattgtggccttcatccggcaataggaataagtgtacttgttgagaagtcattgataacttgcaaaaaaggagttttagggatgcatgatttacttgaggaaatgggtagaaTGATGGACATGCAAGACTCTAAACAACATCTTGGACGCAGTAGGTTGTCCTCTCTAGATGACATTAATCAAGTATTGAAGGAAAATACGGGAATTGAGAAGATTGAAGGTGTGGTTTTGAAGCAACATAATAAAGATATTTTGAAAGATCATGGAGCATTCTCCAAGATGTGCAACCTAAGACTTCTCATCATATTATGTGAATTGCACCTGTCTCGTGGTTTCAAATGTCTTCCTAGCTCATTGAAAGTTCTTATTTGGGTGGAATGTCCTTTGAAGACTCTACCACTTGGTTTGCAACTACGTGAACTTGTTCACTTGCAAATGAATAATAGCAGAGTAGAACAACTTTGGAATGGAAGTCAGGTTTTTGAAAAACTAAGAGTTGTTGATTTGAGTTATTCCAGCAATCTGATTCGAATTCCAAATATTTCTAATGTTCCATTGCTTGAAGAGCTGATCCTTGATGGTTGTATATCGCTTGTTGAGGTTGACCAATCTGTTGGGCAGCACAAGAAGCTAGAAGTGTTAAGCCTTACAGGATGCATAAAGCTCGAAACCTTGCCCCGGAAATTCGAAATGAGTTCACTGAAGAGGCTCATTCTCTGTGGCTGCTCAAACGTGAAATCACTTCCTGAATTTGGGGAGAGTATGGAGTATTTGTCAGTGTTGAATTTAATGAAATGCTCAAGTCTTCTTTCCATTCCAGAAACTGTTACCAATTTGAAGTCACTGAAAATTCTCAATTTGTCCGGTTGCTCAAAAATCTGTAGACTGCCAGATAATATAAAGGAAAACTGGGCTTTGGAAGATCTTGATCTTAGTGAAACCTCTATAAGAGTGGTGGATTCATCTTTGTTTCAATTGGAAAATCTCGAAAAGCTTTCTTTTCGTGGTTGCAGTGGACCAGTATCCAACACCACCACCTCTGATTCGAGTGTTTCACGCTTAACATTGCCTCCTCATATCCCAGGACTTCCCTTGTTAACCATATTTGATCTAAGCTATTGCAATCTCCATCATGAATTGATTCCTGATCTGCGCCACTTATCATCATTGGAGACTTTGATTTTAAGTGGGAATACAGAGCTTATCTTAACTCACAGCGTTGCTAAACCTCCTATGCTGCATTTTCTTGAAGCAGAAGGTTGCCGACAATCGTTTGATCCATGTGTGTTAAATTTTCATGGGGAAGCTGGACTACTGTTAGATTTATGCAAGTTATGGAAGCTGTTCAAGACGGATTATAACAAGCTCTTATGTCAGGTTGTAGATCATAGTTATCCTATCACGTACCAGGAAATTCCTCCAAATTTTGGCAAGGAGATATTCTTTCCCATTGGTACACGTTTATCAGAGCTTGAATCAAGCGCATCAATCACAGTGGACATACCTAATGAATGTTGTGAGGGTAAGTGGTGGGGAATTGCTGTATTCCTTGCCTTCAAACCTCTAGAATCTTCAACTAATTTTCCGAGTCTAAAATTTGGTTGGAGCTTTGGAGCTTCAAATACTGATCCTGAAGTTGGCTCTTCTTTCTTATATCTCTCCTCCAATGCTGTAAAGGCGCATTATGATTGTTGTCTTGTAACGATGATAGTGAGTGAAAATTACATATACATTCAGCTACACCACAGAAGCTATGACAATGTAAGTGAATCAAAGCCTTTTAGCAAGCATCGAAAGCCTAATTTTAGTGAAAATAGTAGGCTGCGTTTTAGTGTGCAAGGAGAAGAGATAAATATGAAAGAATGTGGGTATCATGTCTTTGGTAATGAAGATTTTAGAAATAAATTCTCATTTAAATTGAACAAAGAGAGTACTGTCACACCAAATTCCAGGGATTCCAATAGTACAGAAGAAATGGACATCATATTAGAAGATGAAACGGAAACAACCAGCTTGGGTGATGATCGCATCGATGAAGAATCCAAGTTAGTTAGTGTTAATTCTGATCATATGGAGGCTGATATAAGAATAAAGGATTCGACCAGAGGTAGATGGAAAAAGGAAAGGATACTGTCATCTTCTCAATGGAACAAGCAAACAGTACCTGGCTTCAACACATACATTCTTAGATGGAAACTCACATTTTAA 3171 0.305 MLNHDNIIIFNVLLIRYEAQLIDEIVEEAWTKIESRLPTQDDNNDDDDDDLIAINAKVNEVCSCLSPESTDVLFIGIWGMGGSGKTTLTSTVCKKIRSQFEEHCILRVGEVSREGDQDLVNLQNQLLSHLKPKCMVIKTLNQGKDAIKNLLYKKKVLIVLDDVRTTRQLENLAGSRVWFGPGSRIIVTTRDQHLLSSHGVTLFKLYEMKALDTNESLQLFHKEAFKGEKKQEEYLDLSRKFVEYAGGLPLALKVLGSNLCTRNIDEWDEAFDKMRKDQDGGIMNILRICYDMLEEGHKTIFLDIACFFKGWYKDKVIRILKNCGLHPAIGISVLVEKSLITCKKGVLGMHDLLEEMGRMMDMQDSKQHLGRSRLSSLDDINQVLKENTGIEKIEGVVLKQHNKDILKDHGAFSKMCNLRLLIILCELHLSRGFKCLPSSLKVLIWVECPLKTLPLGLQLRELVHLQMNNSRVEQLWNGSQVFEKLRVVDLSYSSNLIRIPNISNVPLLEELILDGCISLVEVDQSVGQHKKLEVLSLTGCIKLETLPRKFEMSSLKRLILCGCSNVKSLPEFGESMEYLSVLNLMKCSSLLSIPETVTNLKSLKILNLSGCSKICRLPDNIKENWALEDLDLSETSIRVVDSSLFQLENLEKLSFRGCSGPVSNTTTSDSSVSRLTLPPHIPGLPLLTIFDLSYCNLHHELIPDLRHLSSLETLILSGNTELILTHSVAKPPMLHFLEAEGCRQSFDPCVLNFHGEAGLLLDLCKLWKLFKTDYNKLLCQVVDHSYPITYQEIPPNFGKEIFFPIGTRLSELESSASITVDIPNECCEGKWWGIAVFLAFKPLESSTNFPSLKFGWSFGASNTDPEVGSSFLYLSSNAVKAHYDCCLVTMIVSENYIYIQLHHRSYDNVSESKPFSKHRKPNFSENSRLRFSVQGEEINMKECGYHVFGNEDFRNKFSFKLNKESTVTPNSRDSNSTEEMDIILEDETETTSLGDDRIDEESKLVSVNSDHMEADIRIKDSTRGRWKKERILSSSQWNKQTVPGFNTYILRWKLTF 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01659 1056 Gene3D - 210 294 IPR042197 -
Aip05g01659 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 304 IPR027417 -
Aip05g01659 1056 PRINTS Disease resistance protein signature 245 259 - -
Aip05g01659 1056 PRINTS Disease resistance protein signature 150 164 - -
Aip05g01659 1056 PRINTS Disease resistance protein signature 74 89 - -
Aip05g01659 1056 PRINTS Disease resistance protein signature 598 614 - -
Aip05g01659 1056 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 554 744 IPR044974 GO:0006952
Aip05g01659 1056 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 569 IPR044974 GO:0006952
Aip05g01659 1056 SUPERFAMILY "Winged helix" DNA-binding domain 282 385 IPR036390 -
Aip05g01659 1056 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 554 744 - -
Aip05g01659 1056 Pfam NB-ARC domain 56 280 IPR002182 GO:0043531
Aip05g01659 1056 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 48 569 - -
Aip05g01659 1056 Gene3D Ribonuclease Inhibitor 574 777 IPR032675 -
Aip05g01659 1056 Gene3D Ribonuclease Inhibitor 422 573 IPR032675 -
Aip05g01659 1056 SUPERFAMILY L domain-like 402 778 - -
Aip05g01659 1056 Gene3D - 34 201 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01659 Aip-Chr5 30583646 30588125 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01659 12 655 WRKY Transcription Factor Family AT4G12020 33.480 7.09e-84 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01659 - - adu:107489070 1897.09