Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01642 ATGCCGTCGAACGCGGATCTGGACCGGCAGATAGAGCAGCTGATGGAGTGCAAACCGCTGGGGGAGGCGGAGGTGAAGGCACTATGCGATCAGGCGAGGGCGATTCTTGTGGAGGAGTGGAACGTGCAGCCGGTGAAGTGTCCCGTTACGGTTTGCGGTGACATCCATGGCCAGTTCTACGATCTCATCGAGCTTCTCTGCATATGTTGGAATTGCTACCAGTCCTCATGGCGCTGGCTATTTGCAGATCGTGGGTACTATTCAGTGGAGACGGTTACACTTTTGGTGATCTTAAAAGTCCGTTATAGAGATAGAATTACAATTCTTAGGGGAAATCATGAAAGCCGTCAAATTACTCAAGTGTATGGCTTCTATGATGAATGCTTGAGAAAATATGGGAATGCCAATGTCTGGAAGTACTTTACCGACCTGTTTGATTATTTACCACTAACTGCCCTCATTGAGAGTCAGATTTTCTGCTTGCATGGAGGCCTGTCACCTTCTTTGGATACGCTGGATAATATCCGTGCCTTGGACCGCATACAGGAGGTTCCGCATGAAGGACCAATGTGTGACCTCTTGTGGTCTGATCCAGATGATCGCTGTGGTTGGGGAATATCTCCACGTGGTGCTGGATACACATTTGGCCAGGATATTGCTGCTCAGTTCAATCATACCAATGGTCTCTCCCTGATATCTAGGGCTCACCAGCTTGTCATGGAAGGGTACAATTGGTGCCAGGAAAAGAATGTAGTGACCGTTTTTAGCGCTCCAAATTACTGTTACCGATGTGGGAATATGGCAGCCATACTGGAAATTGGAGAGAACATGGATCAGAATTTTCTGCAGTTTGATCCAGCTCCCAGGCAAATTGAGCCCGACACTACGCGGAAGACCCCAGACTATTTTTTGTGA 915 0.482 MPSNADLDRQIEQLMECKPLGEAEVKALCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELLCICWNCYQSSWRWLFADRGYYSVETVTLLVILKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHTNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01642 304 PRINTS Serine/threonine phosphatase family signature 228 248 IPR006186 GO:0016787
Aip05g01642 304 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Aip05g01642 304 PRINTS Serine/threonine phosphatase family signature 143 169 IPR006186 GO:0016787
Aip05g01642 304 PRINTS Serine/threonine phosphatase family signature 172 199 IPR006186 GO:0016787
Aip05g01642 304 PRINTS Serine/threonine phosphatase family signature 108 132 IPR006186 GO:0016787
Aip05g01642 304 PRINTS Serine/threonine phosphatase family signature 250 266 IPR006186 GO:0016787
Aip05g01642 304 Pfam Calcineurin-like phosphoesterase 48 237 IPR004843 GO:0016787
Aip05g01642 304 Gene3D - 2 304 IPR029052 -
Aip05g01642 304 SUPERFAMILY Metallo-dependent phosphatases 6 291 IPR029052 -
Aip05g01642 304 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 1 304 - -
Aip05g01642 304 ProSitePatterns Serine/threonine specific protein phosphatases signature. 109 114 IPR006186 GO:0016787
Aip05g01642 304 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 304 - -
Aip05g01642 304 CDD MPP_PP2A_PP4_PP6 6 288 - -
Aip05g01642 304 SMART pp2a_7 20 288 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01642 Aip-Chr5 29889329 29892893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01642 49 223 Calmodulin-binding Proteins AT5G63870 35.185 3.02e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01642 K04382 - jre:108985002 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01642 05 29889329 29892893 Aip05g01642 05 29889329 29892893 ECH
Aip05g01642 05 29889329 29892893 Aip05g01642 05 29889329 29892893 PCT