Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip05g01631 | ATGAAGAGGTCTAGGGACGATATTTTCGCGAGTCCTCAACTTAAACGGCCTATAGTGTCTTCTCGAGAAGAAGCGTCCGGGCAACCCCAGATGATGAATGGAGGTGCTGTTGCTCAGAAGCTGACTACAAATGATGCATTGGCATATCTCAAGGCAGTAAAGGATATATTTCAGGATAAGAGGGACAAGTATGATGACTTTTTGGAAGTCATGAAAGATTTTAAGGCTCAAAGAGTTGATACTGCAGGCGTGATAGCAAGGGTTAAACAGCTCTTTAAAGGGCACAGAGACTTGCTTTTGGGATTCAACACCTTCTTGCCAAGGGGTTATGAAATCACACTTCCACTGGAGGATGAACAACCTGCCCCAAAGAAGCCTGTTGAATTTGAAGAAGCGATTAATTTTGTGAACAAAATTAAGACCCGGTTTCAAGGTGATGATCGTGTTTACAAGTCATTTCTGGACATATTAAATATGTACAGAAAGGAAAGCAAGTCTATAACAGAGGTCTACCAGGAGGTTGCTGCACTTTTCCAAGAGCATCCGGATCTTCTTGATGAGTTTACTCATTTTCTCCCGGACACTTCCTCAGCAGCCTCTGCTCATTATATTTCTGCTAGAAATTCTATGCTACGTGATAGGAGCTCTGCAATGCCAACTGTACGGCAAATGCATGTTGAGAAGAGAGAAAGGACTATGACCTCACATGGTGATCGTGACCTCAGTGTTGACCGTCCCGACCCTGATAATGACAGAGGTTTGATGAGGGCAGAAAAGGATCAGAGGAGACGTCTAGAGAAGGATAAGGAACGCAGAGAGGATAGGAGAGAACGTGACAGAGACGATAGAGATTATGAGCATGATGGTGGTCGAGATAGGGAAAGGTTCTCCCATAAACGGAAATCTGATCGTAGGGCTGAAGACTCTGGAGCTGAACCATTGCTTGATGATGAAAATATTGGCATGTATAGCCAGGAGCTTGCTTTCTGTGAAAAGGTCAAAGAGAAATTACGAAATCCTGATGACTACCAAGAATTTTTGAAGTGTTTGCATATTTACAGCAGGGAAATAATTACCAGACATGAATTGCAGTCATTGGTTGGTGATTTACTGGGGAAATATCCAGATCTTATGGAGGGGTTTAATGAATTTTTAATACAATCTGAAAAGAATGATGGTGGATTCCTTGCTGGTGTCATGAATAAAAAGTCCTTATGGAGTGACGGACAAAGGCCAAAATCTGTGAAGGTTGAAGACAGGGATCGTGATCGAGACCGTTGTAGGGATGATGGCATGAAAGAAAGGGATCGTGAATTCCGAGAAAGGGACAAATCCACTGCCCCCGCCAACAAGGATGTTTCAGGTCCTAAGATATCCATATATCCCAGCAAGGATAAGTATTTGTCAAAGCCTATAAATGAGCTGGACCTTTCTAACTGTGATCAATGCACTCCGAGCTATCGTCTCTTGCCAAAAAATTACCCAATACCTGTAGCTAGCCAGAGAACAGAACTTGGTGCAGAAGTATTAAATGATCACTGGGTGTCTGTTACTTCAGGAAGTGAGGATTATTCCTTTAAACATATGCGGAAAAATCAGTATGAAGAGAGCTTGTTCAGATGTGAAGATGACAGATTTGAACTTGATATGTTGCTAGAGTCTGTAAATGCAACTACTAAGCGAGTGGAAGAGCTGTTAGAAAAGGTCAATAATAATATAATCAAAGGAGACAGTCCAATTCGTATTGAGGAGCACTTAACAGCCTTAAATCTTAGGTGCATTGAACGATTATATGGTGACCATGGGCTAGATGTGATGGATGTGTTACGGAAAAATGCATCTCTGGCTTTGCCAGTGATATTAACCCGCTTGAAGCAGAAACAAGATGAATGGGCAAGGTGTCGTGCTGATTTTAATAAAGTCTGGGCTGAAATATATGCCAAAAATTATCATAAATCTCTTGATCACCGTAGCTTCTACTTTAAACAACAGGATACAAAAAGCTTGAGTACTAAAGCATTACTGGCCGAAATCAAAGAAATCAGTGAGAAGAAACGCAAAGAAGATGATGTTCTTCTTGCGATTGCTGCTGGAAATAGACGTCCTGTTCTTCCAAACCTTGAGTTTGAGTACACTGATTCTGATATTCATGAAGATCTGTATCAGCTTGTAAAATATTCTTGTGGAGAAATGTGTACAACTGAACAATTGGATAAAGTTATGAAGGTTTGGACAACATTTTTAGAACCCATGCTGTGTGTTCCTTCTCGGCCTCTGGGTGCCGAGGATACAGAAGATGTTGTCAAGGATAAGAATAATTCTGCCAAAAGTGGCACTGCAAGTGTTGCCGAGAGTGAGGGTAGTGCTGGTGCTGGTGCTGGTGCTATTGTAGTGAATCCTAAGCATATTAACACTTCTAGAAATGGGGATGAGTGCATGCCATTAGATCAATCAAATTCTAGCAAAGTATGGCAATCAAATGGTGACAGTGGTGCCAAAGATGATAAATGTCTTGATCCAGACCGCACTCTGCATAAAACTGAAACTTCAGGCACTAATACACAGCATGGTAAAATTAATACTAATTCATTCACACCTGATGAAATGTCAGGAGTCAATAAGCAAGACCACTCCAGTGAGCGGTTGGTGAATGCTAATGTTTCCCCAGCATTAGGAGTGGAGCTAAGTAATGGAAGAACAAGCATGGATAATGCATCAGGAATCATTGCCACTAATCCGTCTAGACCTGGTAATATATCTGGCGAAGGTGGAGTTGATTTACCTTCATCAGAGGGTGGTGATTCTACCAGACCAGGTACATCCACAAATGGGACCATCACAGAAGGGACCGAAGTTCACAGGTACCCAGAAGAATCAGTTCGGCAGTTAAAAAGTGAAAGAGAAGAGGGCGAGTTGTCCCCAAATGGAGACTTTGAAGAGGATAACTTTGCTGTTTATGGAGATACTGGTTTGGATGCAGTCCATAAGGGGAAGGATGGCGGTTCGAGTCAGCAATACCAAAACAGAAATGGAGAACAAGCTTTAGGTGAAGTTAGAGGAGAGAATGATGTTGATGCTGACGATGAAGGTGAGGAAAGTCCACACAGGTCATCTGAGGACAGTGAGAATGCTTCTGAGAATGTTGATGTTTCTGGAAGCGAGTCTGCTGATGGTGAGGAATCTCGAGAAGAGCACGAGGATGGGGAAAATGATAACAAAGCTGAGAGTGAAGGTGAAGCTGAAGGAATGGCTGATGCCCATGATGTTGAAGGAGATGGAACCTCCTTGCCATTTTCAGAGCGCTTCCTATTAACTGTAAAGCCGCTGGCGAAGCATGTTCCCCCAGCGTTACATGGGAAAGAAAGGACTTCTCGAATTTTTTATGGAAATGATTCCTTTTACGTCCTGTTTAGACTTCATCAGACATTGTATGAGAGGATACAATCAGCAAAGATTAACTCATCATCTGCTGAAAGGAAATGGGGGGCTTCAAATAATACGGGTTCTACTGATCAATACAACAGGTTCATGAATGCGCTCTACAATTTGCTGGATGGTTCATCTGATAATACAAAATTCGAGGATGATTGTCGAGCCATTATTGGAACTCAGTCATATCTCTTATTCACTTTAGACAAGCTGATTTATAAGCTTGTTAAACAGCTTCAAAATGTTGCCACTGATGAGATGGATAACAAGCTTCTCCAATTATATGCATATGAGAAATCAAGAAAACCAGGAAGATTTGTTGACGCAGTTTATCATGAAAATGCCCGTGTTCTTCTTCATGAAGAGAACATATACCGAATTGAATATTCACCTGGACCTAAGAAATTGTCTCTTCAACTGATGGACTATGGACATGATAAGCCTGAAGTAACTGCCGTGTCAATGGACCCCAACTTTTCAGGCTATTTGTACAACGAATTTTTTTCTGTTGTCTCTGAAAAAAAGGAAAAGTCTGGAATTTTCTTGAGAAGGAACAAACGTAGATATGCCTGTGCTGATGACATTTCAAGTGAGGCTGTGGAAGGACTACAAGTTATTAATGGTCTTGAGTGTAAGATATCTTGCAGTTCATCCAAGGTGTCATATGTTTTAGATACGGAAGATTTTTTGTTCCGGAAGAGAAAGAATAGGGCGAAGTCTTTAACCATTAGTTCAAGAAGAGTACAACGGTTCCACAAATTGTTTTCCCTTACATGCTGA | 4209 | 0.4151 | MKRSRDDIFASPQLKRPIVSSREEASGQPQMMNGGAVAQKLTTNDALAYLKAVKDIFQDKRDKYDDFLEVMKDFKAQRVDTAGVIARVKQLFKGHRDLLLGFNTFLPRGYEITLPLEDEQPAPKKPVEFEEAINFVNKIKTRFQGDDRVYKSFLDILNMYRKESKSITEVYQEVAALFQEHPDLLDEFTHFLPDTSSAASAHYISARNSMLRDRSSAMPTVRQMHVEKRERTMTSHGDRDLSVDRPDPDNDRGLMRAEKDQRRRLEKDKERREDRRERDRDDRDYEHDGGRDRERFSHKRKSDRRAEDSGAEPLLDDENIGMYSQELAFCEKVKEKLRNPDDYQEFLKCLHIYSREIITRHELQSLVGDLLGKYPDLMEGFNEFLIQSEKNDGGFLAGVMNKKSLWSDGQRPKSVKVEDRDRDRDRCRDDGMKERDREFRERDKSTAPANKDVSGPKISIYPSKDKYLSKPINELDLSNCDQCTPSYRLLPKNYPIPVASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNATTKRVEELLEKVNNNIIKGDSPIRIEEHLTALNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQDEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKEDDVLLAIAAGNRRPVLPNLEFEYTDSDIHEDLYQLVKYSCGEMCTTEQLDKVMKVWTTFLEPMLCVPSRPLGAEDTEDVVKDKNNSAKSGTASVAESEGSAGAGAGAIVVNPKHINTSRNGDECMPLDQSNSSKVWQSNGDSGAKDDKCLDPDRTLHKTETSGTNTQHGKINTNSFTPDEMSGVNKQDHSSERLVNANVSPALGVELSNGRTSMDNASGIIATNPSRPGNISGEGGVDLPSSEGGDSTRPGTSTNGTITEGTEVHRYPEESVRQLKSEREEGELSPNGDFEEDNFAVYGDTGLDAVHKGKDGGSSQQYQNRNGEQALGEVRGENDVDADDEGEESPHRSSEDSENASENVDVSGSESADGEESREEHEDGENDNKAESEGEAEGMADAHDVEGDGTSLPFSERFLLTVKPLAKHVPPALHGKERTSRIFYGNDSFYVLFRLHQTLYERIQSAKINSSSAERKWGASNNTGSTDQYNRFMNALYNLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQNVATDEMDNKLLQLYAYEKSRKPGRFVDAVYHENARVLLHEENIYRIEYSPGPKKLSLQLMDYGHDKPEVTAVSMDPNFSGYLYNEFFSVVSEKKEKSGIFLRRNKRRYACADDISSEAVEGLQVINGLECKISCSSSKVSYVLDTEDFLFRKRKNRAKSLTISSRRVQRFHKLFSLTC | 1402 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip05g01631 | 1402 | MobiDBLite | consensus disorder prediction | 933 | 949 | - | - | |
| Aip05g01631 | 1402 | MobiDBLite | consensus disorder prediction | 908 | 1094 | - | - | |
| Aip05g01631 | 1402 | ProSiteProfiles | PAH domain profile. | 125 | 195 | IPR003822 | GO:0006355 | |
| Aip05g01631 | 1402 | PANTHER | SIN3B-RELATED | 1 | 1391 | IPR039774 | GO:0003714 | |
| Aip05g01631 | 1402 | Gene3D | Paired amphipathic helix | 124 | 196 | IPR036600 | GO:0006355 | |
| Aip05g01631 | 1402 | Pfam | Paired amphipathic helix repeat | 62 | 106 | IPR003822 | GO:0006355 | |
| Aip05g01631 | 1402 | Pfam | Paired amphipathic helix repeat | 149 | 192 | IPR003822 | GO:0006355 | |
| Aip05g01631 | 1402 | Pfam | Paired amphipathic helix repeat | 341 | 385 | IPR003822 | GO:0006355 | |
| Aip05g01631 | 1402 | ProSiteProfiles | PAH domain profile. | 316 | 388 | IPR003822 | GO:0006355 | |
| Aip05g01631 | 1402 | SUPERFAMILY | PAH2 domain | 323 | 385 | IPR036600 | GO:0006355 |
Showing 1 to 10 of 33 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip05g01631 | K11644 | - | gmx:100811928 | 2209.88 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aip05g01631 | 05 | 29444797 | 29457226 | Aip05g01631 | 05 | 29444797 | 29457226 | ECH |
Showing 1 to 1 of 1 entries