Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01626 ATGATGAGTGAACGGGGTTCTTCATGCACAAGACCTGGCGGGAGATCTTCATTCGTCGTGCCAAGAGCTTCTGTGGAGCTCTTTGAGGCAAACATATTAGCTTTATTGTCTGAAATTTTGTTAGCAGTTTTCACCGAAGTTATGCAGGGCAATCCAGAATTTACACATCATTTGATACATAAGCTGAAGTACCATCCTGGCCAAATTGAAGCTGCTGCTATCATGGAGCACATCTTAGAAGTCATCAGGTATTCGACTAAATCAATTGAGAGGGAAATAAACTCTGTCAACGACAATCCTCTGATTGATGTCACTAGTAGCAAGGCTTTGAATGGTGGCAATTTTCAAGGCACCCCAATAGGAGTTTTGATGGATAATGCACGTTTAGCTGTTGCTTCAATTGGCAAACTCATCTTTGCCCAATTTACCGAGCTAGTCAATGACTTGTATAACAACGGTTTGCCATCGAATCTCTCTGTCAGCAAAAATCCGAGTCTGGATTATGGTTTTAAGGCATCTGAGGTTGCCATGGCTGCTTATTGCTCTAAACTTCAATATCTGGCAAACTCAGTAACCAACCACGTGCAAAGTGCTGAGCAACATAACCAATATGTGAATTTCTTGAGGTTAATTTCTGCTTGA 642 0.4159 MMSERGSSCTRPGGRSSFVVPRASVELFEANILALLSEILLAVFTEVMQGNPEFTHHLIHKLKYHPGQIEAAAIMEHILEVIRYSTKSIEREINSVNDNPLIDVTSSKALNGGNFQGTPIGVLMDNARLAVASIGKLIFAQFTELVNDLYNNGLPSNLSVSKNPSLDYGFKASEVAMAAYCSKLQYLANSVTNHVQSAEQHNQYVNFLRLISA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01626 213 Gene3D Fumarase/aspartase (Central domain) 80 213 - -
Aip05g01626 213 PANTHER HISTIDINE AMMONIA-LYASE 79 213 IPR001106 -
Aip05g01626 213 Gene3D Fumarase/aspartase (Central domain) 17 79 - -
Aip05g01626 213 PANTHER PHENYLALANINE AMMONIA-LYASE 79 213 - -
Aip05g01626 213 PANTHER PHENYLALANINE AMMONIA-LYASE 23 80 - -
Aip05g01626 213 Pfam Aromatic amino acid lyase 79 212 IPR001106 -
Aip05g01626 213 Pfam Aromatic amino acid lyase 23 80 IPR001106 -
Aip05g01626 213 SUPERFAMILY L-aspartase-like 21 213 IPR008948 GO:0003824
Aip05g01626 213 PANTHER HISTIDINE AMMONIA-LYASE 23 80 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01626 Aip-Chr5 29356386 29357141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01626 23 213 Monolignol Biosynthesis Gene Families AT3G10340 65.652 2.12e-98 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01626 K10775 - gmx:100787872 318.546