Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01622 ATGAATGAGGGGGCAATGAAAGCACCAGAGGAAATGGTTCTTTCTCTAGTTGTGTTCTTAACCCTGGAATTCATCACTCCCCTTTTCCGTTACACTCCAAATGCCATTCTTTCTTCAATCATCATTTCTGCTGTCATCAACCTTGTGGACTATCAGGCAACTATTTTGATTTGGAAGATTGATAAATTTGATTTTGTTGAAATGTCACCCGTTACTGACATAGACACCAGTGGCATCCATGCCCTTGAAGAGTTCTTTTAA 261 0.3985 MNEGAMKAPEEMVLSLVVFLTLEFITPLFRYTPNAILSSIIISAVINLVDYQATILIWKIDKFDFVEMSPVTDIDTSGIHALEEFF 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01622 86 PANTHER SULFATE TRANSPORTER 4 66 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip05g01622 86 PANTHER SULFATE TRANSPORTER 66 86 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aip05g01622 86 PANTHER SULFATE TRANSPORTER 1.2-LIKE 4 66 - -
Aip05g01622 86 PANTHER SULFATE TRANSPORTER 1.2-LIKE 66 86 - -
Aip05g01622 86 Pfam Sulfate permease family 12 66 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01622 Aip-Chr5 29236604 29237383 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01622 2 65 Inorganic Solute Cotransporters AT3G15990 54.688 8.35e-19 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01622 K17470 - fve:101305558 87.0409