Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01620 ATGGCTCTGAAGAATGCTGTGCTTCTTCTGAGCCTTCTCTTTGTTTCACATATTTTTTTTATACAAACATGTTATTCCCAAACCAATTTTGATCCTCAGAACATTGAGACTTTCTATCCAATTGAAACACCAGAAGAACCACCATTACCAACAACAAATCCAGAAGAATCACCGCCATCATCGCCATCTCCATCACCATCATCAAACAGTAAAGTAGCAAAGGCTGTAGCTGCAACTGCAGCATGCACACTAGCTGTTTGTGGAATTGTGTTCTTCTTAGGTCTAAGGTGCTTCAGAGCAAAGAAGAGAATTGACATAACCAACACTACTACAACAACCATGGCTGCTTCTTCTGCAACACACAGAGATTATAGGAATGTTGTGGTGCCTCTGCCTCAGCCTCGACCTCAACCTCAGGTGAGTGTGTATGAGAGAATGGAAGGTAACATAAAAGGGCTGATTGTTGATGAGAATGGTTTGGATGTTGTATATTGGAAAAGGCTTCAAGATGGTAAGAACTCAAAAGAGGTATTGGGTAAAAGTCACAAAAACAAAGAAGAAAGCGATCACGAAGGATATTATGATCAAAGGACACAACCTGAATCTAATGTTCAAGAAACTCCTTTGCTAAGAGGGTTATCTTCAAATTCTTCACATTTGAATATATTTCCTGTAGAACCATACACTATTATGAAGATTCCACCACCTCATCCTCCTCCTCCAATTAATGGTTTTGATAAACTTGATTTTGTTAGCCATTCACAACCAAAACCACCCTCCATTTCTTCATCATCAACTCCTACACCACTTTCACCTTCCACTCCAAGAATCCAAGATAGAAAAAGTTCAGCACCTACACTGCCGCCACCTCCACCACCTCCGCCACCAATTCCAAAGAGCCAAGCAGTGCCACCAGCATGTCCTCCACCAGTACCAGAAAGAAAGAGCCAAGCACCTCCACCACAACCACCTCCTCTTCCACCAATTACTGGTAGAAAGAGCCAAGCCCCGCCACCGCCGCCTCCACCGATTCCTTCTAGAAAGGGGCCACCAAAGGGAGGAAATCCAAAGTCATCATCAAAACCACCTCCTACCCCTATTGAAGCACCATCATACTTGAGAAAAGGCAAATCTAAAGATGAAGATATGCAAGAAACCGGCAATCGTCAAGTGAAACTGAAGCCTCTGCATTGGGATAAAGTCAATGCTAATCTTGATCACTCCATGGTTTGGGACAAAATTGACCGTGGCTCCTTCAGGGTCGATGACGATCTTATGGAAGCTCTCTTTGGCTATGTTGTTAACCACAACACCCCAAAAGCGAATGATTCAGGGAGTCCAAGCAAGGGTTCCTCTGCCTCAGCTCCATCAACAAAGGCATCCACCCTTCTTGACCCAAGAAAATCACAGAACACTGCCATTGTGTTGAAATCTCTTGCAATATCAAGAAAAGAAGTCATTGATGCACTCCTTGATGGTCATGGCCTCAACATAGACACCATTGAAAAGCTTTCTAGAGTTGCTCCAACAGAAGAAGAGCAATCTCTAATACTCCAATACAGAGGAGATCCTGAAAACCTTCCTGCAGCGGAGTCCTTCCTGTATCATACTCTCAAAGCTGTTCCTTCGGTGTTTAAGCGCTTGAATGCCATGCTGTTCAGGCTGAACTATGATGCCGAGATTGTCGAAATCAAGGAGTTTCTGCAGACACTTGAGTTGGGATGTAAGGAGCTTAGGAACCAAGGAGTGTTCCTGAAGCTTCTTGAAGCAGTGCTCAAGGCCGGAAATCGCATGAATGCAGGTACTCATAGAGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTTAGGAAACTTTCTGATGTGAAGAGCACCGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAGGAAGTGGTCCGATCTGAAGGCAAACGTGCTGTTCTCAATCGAGACTACAGCATGAGCCGAAGTAGCAGCAGAAGTAGAAGTAGCAGCAGTATTAGCAGTGGAAACACTGAGAATTCTGTTTCAGATGAACAAAGAAAAAGGGAATACATAATACTAGGATTGCCAATTGTTGGAGGGGTCAGTTCTGAGTTCTCCAATGTAAAGAAAGCAACACTAACAGATTACAAAAGTTTTGTTGGTTCAATCTCAGCACTTTCAGCAAGGATAGCTGAGATTCGACAACTCGTTTTGAAGTGTGGAGGAAATGATAAAGGAGGGAATTTTGCAAGAGAAATGAACCGTTTTCTATCAGAAGCCGAGGAAGAAGTGAAATTGGTGAGTGAAGAACATGGAAGGGTGATGCAGCTTGTGAAGAAAACAACAGCTTATTATCAAGGAGGAGGGGCATGGAAAGAGAGTGAACAACCACTTCAACTGTTTGAGATAGTGAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGGGCACAAAGTAG 2475 0.4339 MALKNAVLLLSLLFVSHIFFIQTCYSQTNFDPQNIETFYPIETPEEPPLPTTNPEESPPSSPSPSPSSNSKVAKAVAATAACTLAVCGIVFFLGLRCFRAKKRIDITNTTTTTMAASSATHRDYRNVVVPLPQPRPQPQVSVYERMEGNIKGLIVDENGLDVVYWKRLQDGKNSKEVLGKSHKNKEESDHEGYYDQRTQPESNVQETPLLRGLSSNSSHLNIFPVEPYTIMKIPPPHPPPPINGFDKLDFVSHSQPKPPSISSSSTPTPLSPSTPRIQDRKSSAPTLPPPPPPPPPIPKSQAVPPACPPPVPERKSQAPPPQPPPLPPITGRKSQAPPPPPPPIPSRKGPPKGGNPKSSSKPPPTPIEAPSYLRKGKSKDEDMQETGNRQVKLKPLHWDKVNANLDHSMVWDKIDRGSFRVDDDLMEALFGYVVNHNTPKANDSGSPSKGSSASAPSTKASTLLDPRKSQNTAIVLKSLAISRKEVIDALLDGHGLNIDTIEKLSRVAPTEEEQSLILQYRGDPENLPAAESFLYHTLKAVPSVFKRLNAMLFRLNYDAEIVEIKEFLQTLELGCKELRNQGVFLKLLEAVLKAGNRMNAGTHRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRDYSMSRSSSRSRSSSSISSGNTENSVSDEQRKREYIILGLPIVGGVSSEFSNVKKATLTDYKSFVGSISALSARIAEIRQLVLKCGGNDKGGNFAREMNRFLSEAEEEVKLVSEEHGRVMQLVKKTTAYYQGGGAWKESEQPLQLFEIVKDFLGMVDQACIEIARNMQKRKGTK 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01620 824 Gene3D Formin, FH2 domain 405 824 IPR042201 -
Aip05g01620 824 ProSiteProfiles Formin homology-2 (FH2) domain profile. 383 824 IPR015425 -
Aip05g01620 824 Coils Coil 745 765 - -
Aip05g01620 824 SMART it6_source 383 821 IPR015425 -
Aip05g01620 824 Pfam Formin Homology 2 Domain 386 806 IPR015425 -
Aip05g01620 824 MobiDBLite consensus disorder prediction 373 394 - -
Aip05g01620 824 MobiDBLite consensus disorder prediction 175 196 - -
Aip05g01620 824 PANTHER FORMIN-LIKE PROTEIN 4 8 822 - -
Aip05g01620 824 MobiDBLite consensus disorder prediction 255 281 - -
Aip05g01620 824 PANTHER FORMIN-RELATED 8 822 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip05g01620 824 MobiDBLite consensus disorder prediction 234 394 - -
Aip05g01620 824 SUPERFAMILY Formin homology 2 domain (FH2 domain) 460 821 - -
Aip05g01620 824 MobiDBLite consensus disorder prediction 175 202 - -
Aip05g01620 824 MobiDBLite consensus disorder prediction 650 678 - -
Aip05g01620 824 MobiDBLite consensus disorder prediction 40 70 - -
Aip05g01620 824 MobiDBLite consensus disorder prediction 284 369 - -
Aip05g01620 824 MobiDBLite consensus disorder prediction 43 65 - -
Aip05g01620 824 MobiDBLite consensus disorder prediction 651 675 - -
Aip05g01620 824 MobiDBLite consensus disorder prediction 437 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01620 Aip-Chr5 29207528 29210155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01620 13 821 FH2 protein (formin) Gene Family AT1G70140 43.489 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01620 - - gmx:100780368 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01620 05 29207528 29210155 Aip05g01620 05 29207528 29210155 ECH