Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01596 ATGAGAACGCTTGCACGCCCTCTCTCCCAGCCCTTCATCTTCATCACCGCTGAGAACCCTTACACCCAGCCCTTTCTCCGAGCCCTCTATCGCACCTTCTCGCACCTGCTCTGTCGCAACCCTCACACCCTCAATGCAAGCCTCCTCCTCGGATTCGCCACCCTCGCACCCTCTCTCGCAACTCTCTATCGACGTTGCTCCGTTGGCGCACCCTGCATCGGCGTGCCCTCCCTCAGTGGGTACTGTTCTGTGGATGGAGAAAGAGGAATTCAAAGACTACTTGTATACGAATATATGTCGAATAAAAGCTTAGAATATCATCTTTTCAATAAAGCCTATGATCCTCTTCCTTGGAAAACAAGACTTGATATAGCACTTGGAGTAGCTCAAGGGTTAGCATATCTGCATGAAGAATCAAAAGTTCAGAGTTCACAGAAGCTACTTACCGAAAGAAAGAGCAGAGGCTTGGACGCTCCGGCAGCGAAGATGGCGAAGATTGAGAAGCGGCACAGAGGCTCGGACGCTCCAACGCAGAAGATGACAAAGACTGAGAAGCGGCACAGAGGCTCGGACGCTCTGACGATAATGACTCACTGCAGCTGTAACGTCGAGACTGAGAGGAGAGGATTTTAA 633 0.5103 MRTLARPLSQPFIFITAENPYTQPFLRALYRTFSHLLCRNPHTLNASLLLGFATLAPSLATLYRRCSVGAPCIGVPSLSGYCSVDGERGIQRLLVYEYMSNKSLEYHLFNKAYDPLPWKTRLDIALGVAQGLAYLHEESKVQSSQKLLTERKSRGLDAPAAKMAKIEKRHRGSDAPTQKMTKTEKRHRGSDALTIMTHCSCNVETERRGF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01596 210 Gene3D Transferase(Phosphotransferase) domain 1 74 200 - -
Aip05g01596 210 Pfam Protein tyrosine and serine/threonine kinase 77 139 IPR001245 GO:0004672|GO:0006468
Aip05g01596 210 PANTHER OS01G0588500 PROTEIN-RELATED 78 142 - -
Aip05g01596 210 SUPERFAMILY Protein kinase-like (PK-like) 74 138 IPR011009 -
Aip05g01596 210 PANTHER OS07G0495150 PROTEIN 78 142 - -
Aip05g01596 210 MobiDBLite consensus disorder prediction 165 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01596 Aip-Chr5 28607892 28610501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01596 77 138 Trihelix Transcription Factor Family AT1G23540 53.226 6.30e-14 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip05g01596 PK_Tyr_Ser-Thr 3.7e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01596 - - ahf:112748208 133.65