Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01593 ATGATGAATTACTCATCGTCTTCTTCAGAAAAGCCAGCATCATCAGAGCTGAAGCTATTAGGTTTTCCTTTGGAAAATACCACTAGCAGCACTAATAATAACTGTATAGTCTGTTCATACTGTGATCGAAGATTCCAGAACTTTCAAGCACTTGGAGGACACCAGAATGCCCATAGAAGAGAGAGGCAAATTATCGCTATGCATAATCTACTACCGTACCAATACAAACCAATAATAATCGCTGCTTTTGGTGACGCTGTATTGCCACCGCCGGAAAAGCTATTGTTACCTGCGGTGGAGGCATCACCGGCGGGAATGCACCGCCGCAGTAACTCTCCCTCTGTAGGAAGAGTTAATGATGATGACGACATTGATCTTGAATTGAGATTAGCTACCTCCCCTGATAAGGAGTCTATAAGGCAATCTCTCCCTCCTGTCTTTGATGATGCTGCTCCCTCTTTTTCTGCTCTTGCTGGTAACGAGTCTGTAGCTCCCAATAAACATTATTCCATCTACTGTGTCAACTCCTGGTTGAGCAAGGTAACCTACTCCCTGATATCCGTTCCCATCGATCGATTTCCAGTTGAGAAGTCATCAGCATCCAAGAACTGTATATATGGTAGAGATATGTCTGATCCCCTTTACTCTCCCCTCTTGTGA 660 0.4409 MMNYSSSSSEKPASSELKLLGFPLENTTSSTNNNCIVCSYCDRRFQNFQALGGHQNAHRRERQIIAMHNLLPYQYKPIIIAAFGDAVLPPPEKLLLPAVEASPAGMHRRSNSPSVGRVNDDDDIDLELRLATSPDKESIRQSLPPVFDDAAPSFSALAGNESVAPNKHYSIYCVNSWLSKVTYSLISVPIDRFPVEKSSASKNCIYGRDMSDPLYSPLL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01593 219 PANTHER ZINC FINGER PROTEIN 6-LIKE 4 63 - -
Aip05g01593 219 Pfam C2H2-type zinc finger 37 61 - -
Aip05g01593 219 ProSiteProfiles Zinc finger C2H2 type domain profile. 36 63 IPR013087 -
Aip05g01593 219 ProSitePatterns Zinc finger C2H2 type domain signature. 38 58 IPR013087 -
Aip05g01593 219 Gene3D Classic Zinc Finger 11 72 - -
Aip05g01593 219 SUPERFAMILY beta-beta-alpha zinc fingers 32 64 IPR036236 -
Aip05g01593 219 PANTHER ZINC FINGER PROTEIN 5 4 63 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01593 Aip-Chr5 28508915 28512286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01593 14 71 C2H2 Transcription Factor Family AT1G67030 41.667 7.30e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01593 - - aip:107640487 275.404