Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01587 ATGGAAAGGGATGTGTGTGATCTTTCTCCCACATGGGATTGTGAAAATGGCAATAATTCTGTGGAGAAGAGGCTAAGGCTATTTGGATTTGAGCTGAATCCACCTTCAAACAATATGAAAGATCCTAACACTACAGAAGGATCAGATGAAAGTGTGAATTCATCATCTAACTCAGTTTCTTCAGGAGGGGACAAAACCACAGCACAAGATCAAAGAACCACAACCAATAATAATAATGAGAAGAAGTTTGAGTGCCAATACTGTTTGAAGGAATTTGCAAATTCACAAGCACTTGGTGGGCACCAAAATGCTCACAAGAAAGAGAGGATGAAGAAGAAAAGGCTGCAGCTTCAAGCAAGGAAAGCCACCATAAACTACTATCTTCAACAACCCAATTTCCAAAACAACAATTATCATGGTTTTTCTTACCATAATCAGAATCATAATAACAATAACACACCTTGGTTCTATGATCCTTCTTCCTACAACTACTATTCTGACTTCACAGTTTGTGAAGAATCTCAAATTAGCTTCAACCCCAATGATCAAGATTCAAACTTTTTGGTTGAGAAAGCATCAAATAGTAATTGGTATTCATCTCTGCCATCATCATATCAAGCTGCTTCTTCTTCACAACAAGATTCTTGCATGTTCAATTTCTCTAATACTAGTATAGATAATAATAATAATAATAATAGGGCCTACAACATCTTCAAGCCTTGCAACTTTCTTGATTCTTCAAATCATCAAATACAAAGCCATAGTAGTAATAACAAAGCTTTGGATCTTCAATTAGGTCTCAATTTGGAGTCAAATACAAAAAGGGCCTAA 831 0.3586 MERDVCDLSPTWDCENGNNSVEKRLRLFGFELNPPSNNMKDPNTTEGSDESVNSSSNSVSSGGDKTTAQDQRTTTNNNNEKKFECQYCLKEFANSQALGGHQNAHKKERMKKKRLQLQARKATINYYLQQPNFQNNNYHGFSYHNQNHNNNNTPWFYDPSSYNYYSDFTVCEESQISFNPNDQDSNFLVEKASNSNWYSSLPSSYQAASSSQQDSCMFNFSNTSIDNNNNNNRAYNIFKPCNFLDSSNHQIQSHSSNNKALDLQLGLNLESNTKRA 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01587 276 Pfam C2H2-type zinc finger 83 108 - -
Aip05g01587 276 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
Aip05g01587 276 SUPERFAMILY beta-beta-alpha zinc fingers 79 110 IPR036236 -
Aip05g01587 276 MobiDBLite consensus disorder prediction 31 77 - -
Aip05g01587 276 PANTHER ZINC FINGER PROTEIN 5 18 269 - -
Aip05g01587 276 Gene3D Classic Zinc Finger 55 137 - -
Aip05g01587 276 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Aip05g01587 276 MobiDBLite consensus disorder prediction 36 77 - -
Aip05g01587 276 PANTHER ZINC FINGER PROTEIN 5 18 269 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01587 Aip-Chr5 28096416 28097539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01587 24 126 C2H2 Transcription Factor Family AT1G68360 42.478 1.32e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01587 - - adu:107488933 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01587 05 28096416 28097539 Aip05g01587 05 28096416 28097539 ECH