Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01565 ATGTCGATCTCCTGCTCCGACTTCTTCTCTGACTCCGATCTTTTCTGCGCCGAGGACACCTCCGGAATCCTCTCCGAAGAGTCTCCGGAATCCGCTTCCTCCTTCTCCGACTTCGACTCATTATCTCCGCCGCTGCCGCCGATGGAGGAGGAGGAGTCCATAGCCGGATTCCTCGAAGACGAACAAAACTTCGTCCCTGGATTCGAGTACCTCTCGAGGTTCCAATCTCACTCGCTGGATGCCTCCGCAAGAGAAGAATCCGTTGCCTGGATTCTCAAGGTGCAGGCTTACTACGGTTTTCAGCCGTTGACCGCGTATCTTTCCGTCAACTACATGGATCGATTCTTGAACTCTCGGCAGTTGCCGCAAACAAATGGGTGGCCGCTGCAACTTCTATCTATTGCATGCTTGTCTCTAGCGGCAAAGATGGAAGAGCCTCTTGTCCCTTCTCTCTTGGACCTTCAGGTAGAAGGTGCCAAATACATTTTTGAGCCCAGAACAATTCAAAGGATGGAGCTGCTTGTTCTGGGTGTCCTGGATTGGAGGCTAAGATCAGTCACCCCATTTAGCTTTCTCGGTTTCTTTGCTTGCAAGTTGGATTCAACTGGAACTTTTACTAGATTCCTCATTTCACGGGCTACACAAATCATATTATCCAATATCCAAGAGGCTAGCTTTCTTGCATACTGGCCATCATGCATTGCTGCTACGGCCATACTATGTGCAGCTAACGAAATTCCAAATTGGTCCCTCGTCAAGCCTGAGCATGCCGAATCCTGGTGCCAGGGGCTTAGAAAAGTAAGCATATATATACATATCAGCATATTTTTATGGTACTAA 840 0.4881 MSISCSDFFSDSDLFCAEDTSGILSEESPESASSFSDFDSLSPPLPPMEEEESIAGFLEDEQNFVPGFEYLSRFQSHSLDASAREESVAWILKVQAYYGFQPLTAYLSVNYMDRFLNSRQLPQTNGWPLQLLSIACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIQRMELLVLGVLDWRLRSVTPFSFLGFFACKLDSTGTFTRFLISRATQIILSNIQEASFLAYWPSCIAATAILCAANEIPNWSLVKPEHAESWCQGLRKVSIYIHISIFLWY 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01565 279 CDD CYCLIN 90 176 IPR013763 -
Aip05g01565 279 MobiDBLite consensus disorder prediction 24 40 - -
Aip05g01565 279 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 270 - -
Aip05g01565 279 SMART cyclin_7 89 177 IPR013763 -
Aip05g01565 279 Pfam Cyclin, C-terminal domain 186 267 IPR004367 -
Aip05g01565 279 PANTHER CYCLINS 1 270 IPR039361 -
Aip05g01565 279 MobiDBLite consensus disorder prediction 23 45 - -
Aip05g01565 279 ProSitePatterns Cyclins signature. 84 115 IPR006671 -
Aip05g01565 279 Gene3D - 67 184 - -
Aip05g01565 279 Pfam Cyclin, N-terminal domain 57 183 IPR006671 -
Aip05g01565 279 SUPERFAMILY Cyclin-like 46 183 IPR036915 -
Aip05g01565 279 Gene3D - 57 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01565 Aip-Chr5 27108611 27113268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01565 1 269 Core Cell Cycle Gene Families AT1G70210 66.421 1.34e-117 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01565 K18810 - gmx:100775224 417.927