Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01555 ATGGGATCGAGAACACAGAGATGGAGCGAGCTGGAGGAGGACGACGAGAACCTCGACTTCCTTCTGCCGCCAAAGCAGGTCATAGGCCCCGACCAGAACGGTATCAAGAAGGTCATCGAATACAAGTTCTCCGACGACGGCAGCAAGGTTAAGATCACCACCACAACACGCACCCGTAAGCTCGCCAACGCTCGCCTCAGCAAGCGCGCCATCGAGCGCCGCTCATGGCCTAAGTTCGGCGACGCCATCCACGAGGACGTCGGTAGCAGGCTCACCATGGTCTCCACCGAAGAGATCCTCCTCGAGCGCCCTAAGCCCCTCGGTGCCAAAACTGAGGAACCAAAGGCTACTGGTGATTCATTAGGTCAGAAAGGTGCTGTTCTTATGGTCTGTAGGACTTGTGGGAAGAAGGGTGACCACTGGACTTCAAGGTGCCCCTACAAGGATCTTGCTCCACCGTCAGAGGGATTTGTCGACAAGCCTCCAACATCTGATGCTGCAGCTGCTGTTCCTGGTTCAACAAAGGGAGCATATGTGCCTCCTGGAATGAGAGCCGGTGCGGAGAGAACTGGATCGGACATGCGGCGCAGGAATGATGAGAACTCTGTGAGGGTCACTAACTTATCGGAGGACACAAGAGAGCCTGATTTGCTCGAACTGTTCCGCCCATTTGGTGCAGTGAGCAGAGTCTATGTTGCTATTGATCAAAAGACGGGCATGAGCAGAGGATTTGGATTTGTTAACTTTGTAAACAGGGAAGATGCACAGAGAGCAATTAACAAGCTCAATGGATATGGATATGACAATCTCATCCTCAGAGTTGAATGGGCCACCCCCAGGACAAACTAG 849 0.5324 MGSRTQRWSELEEDDENLDFLLPPKQVIGPDQNGIKKVIEYKFSDDGSKVKITTTTRTRKLANARLSKRAIERRSWPKFGDAIHEDVGSRLTMVSTEEILLERPKPLGAKTEEPKATGDSLGQKGAVLMVCRTCGKKGDHWTSRCPYKDLAPPSEGFVDKPPTSDAAAAVPGSTKGAYVPPGMRAGAERTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRTN 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01555 282 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 8 282 - -
Aip05g01555 282 SUPERFAMILY RNA-binding domain, RBD 192 281 IPR035979 GO:0003676
Aip05g01555 282 CDD RRM_eIF3G_like 202 277 IPR034240 -
Aip05g01555 282 PIRSF Transl_init_eIF-3_RNA-bind 2 282 IPR017334 GO:0003743|GO:0005737|GO:0005852
Aip05g01555 282 Gene3D - 173 282 IPR012677 -
Aip05g01555 282 MobiDBLite consensus disorder prediction 161 201 - -
Aip05g01555 282 CDD eIF3G 33 149 IPR024675 -
Aip05g01555 282 Pfam Eukaryotic translation initiation factor 3 subunit G 26 150 IPR024675 -
Aip05g01555 282 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 203 269 IPR000504 GO:0003723
Aip05g01555 282 SMART rrm1_1 202 275 IPR000504 GO:0003723
Aip05g01555 282 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 8 282 - -
Aip05g01555 282 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 5 281 IPR017334 GO:0003743|GO:0005737|GO:0005852
Aip05g01555 282 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 201 279 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01555 Aip-Chr5 26729039 26730656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01555 7 280 Eukaryotic Initiation Factors Gene Family AT3G11400 69.805 6.24e-153 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01555 K03248 - gmx:100776807 493.812