Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01533 ATGAATGTCCTCGACGTTCATTGTCACAGTTCACAGTTTATCACTTTCTCGAACGAATTAATGGCGACGCGAGTGGGAGTGAGCATAACCGCCGCAATGATCTCAGTTCAGTTCTTGGAGGTGGGATTGAACACTCTGGTGAAATCCGCCAATACCAATGGAATGAGCAACTATGTCTTCATTCTTTACTCCAACCTTCTCGCATTCTTCTTCCTTCTCCCGTCCACTTTCTTCTTTTACAGAAATGCCCCTCCTCCTCCTCCTATACCCACCTCTGTCCTCTCTAGAATTTTACTCCTTAGTTGTCTCAGTACTACGGTGCAGACCCTGATGTACACCGGTATTGGATACAGTTCTCCTACTCTGGCCTCTGCCATGGTGGATCTTATCCCTGCTTTCACTTTCATTATTGCCATTTTCTCCAGGATGGAAAATCTGAATATGAAACGACATAGCAGCTATGCAAAAATTATTGGGACAGTGGTTTCCATTGCAGGGGCATTAATCGTTACCTTATATAAAGGGTTGCCAATAACATTAAGTGGTACTAGTGGTTCCTTGCCAAATAAAATTGGAACTAATTATCTCTCAGCAGAAGCAAACTCAAACTGGATTCTAGGTGGTTTTCTTCTTGCAACTGCTAGCTTTTGCCTTTCAATCTTGATTGTTGTTCAGACATGGATTATCAAGGATTATCCTGAAGAATTTGTAGTAACAACCACAGCTTGCGGTTTTGTTGTAGTCCTATCCGCCATAGTAGCCTTGTTTGCAGAGCATAATAAAAAAGCTTGGATACTTAAGCCTGATATGGAATTGGTATCCATATTTTATTCGGCAATTTTTGTGGTATCAATACGAAGCGTGGTGACAACATGGGCATGCCGTAAGAAAGGGCCAGTGTATGTGGCCATGTTCAATCCTTTAGCAATGGTCGTTGCTATTGCTATGGGTATAACATTTCTTGGTGACACTCTTTATCTTGGAAGCGTGATTGGTGCTGTTGCAATAGCTATAGGATTCTATTCTGTGATGTGGGCAATGGCTCAAGAGGAAAATATGGTAAAAAACAATCAATTTGTTCCATCTTCAACAGCACCTCTGTTGCCCAGAAAGAGCACGGATTGTACATAA 1131 0.4191 MNVLDVHCHSSQFITFSNELMATRVGVSITAAMISVQFLEVGLNTLVKSANTNGMSNYVFILYSNLLAFFFLLPSTFFFYRNAPPPPPIPTSVLSRILLLSCLSTTVQTLMYTGIGYSSPTLASAMVDLIPAFTFIIAIFSRMENLNMKRHSSYAKIIGTVVSIAGALIVTLYKGLPITLSGTSGSLPNKIGTNYLSAEANSNWILGGFLLATASFCLSILIVVQTWIIKDYPEEFVVTTTACGFVVVLSAIVALFAEHNKKAWILKPDMELVSIFYSAIFVVSIRSVVTTWACRKKGPVYVAMFNPLAMVVAIAMGITFLGDTLYLGSVIGAVAIAIGFYSVMWAMAQEENMVKNNQFVPSSTAPLLPRKSTDCT 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01533 376 PANTHER WAT1-RELATED PROTEIN 36 349 IPR030184 GO:0016021|GO:0022857
Aip05g01533 376 PANTHER WAT1-RELATED PROTEIN 36 349 - -
Aip05g01533 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 345 - -
Aip05g01533 376 SUPERFAMILY Multidrug resistance efflux transporter EmrE 65 174 - -
Aip05g01533 376 Pfam EamA-like transporter family 41 171 IPR000620 GO:0016020|GO:0016021
Aip05g01533 376 Pfam EamA-like transporter family 207 344 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01533 Aip-Chr5 25958420 25962045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01533 32 358 Nodulin-like Gene Family AT3G28050 46.646 4.48e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01533 - - gmx:100793168 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01533 05 25958420 25962045 Aip05g01533 05 25958420 25962045 ECH
Aip05g01533 05 25958420 25962045 Aip06g03012 06 124565194 124571085 ECH