Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01530 ATGATGGAAGAACATCTAACTCCATTGGCGGTTACACATCTTCTTCAACACACTCTTAGAAGCTTGTGCATCCATGACAATTCTCAGTGGGTCTATGCTGTTTTCTGGAGGATCCTCCCCAGAAACTACCCTCCACCAAAGTGGGAGGGTCAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAACTGGATATTGGTGTGGGAAGATGGATTCTGCAACTTTGCAGCGTCAGCAGCAGCACCTGAAATAAACTCTGGTGATTGTCCTAATAATAATAATAATAATAATAATGGTTCTTCTTCTTCTTCTTCTGTTTATGGTAACTGTGAGTTCCAACCCTACCAAGGCCTGCAACCAGAGCTGTTCTTCAAGATGTCACATGAGATCTATAACTATGGTGAAGGGTTGATAGGGAAAGTTGCTGCAGATCACAGTCACAAATGGATATACAAAGAGCCTAATGAACAAGAAATCAACTTCTTGTCAGCGTGGCATAATTCAGCTGATTCACATCCTAGGACTTGGGAAGCACAGTTCCAATCTGGAATAAAGGATCTTCATTGTTTGTTGATGCAGACCATAGCTCTGATTGCTGTGAGAGAAGGTGTTGTTCAATTGGGAGCAGTTCACAAGGTGATTGAGGACTTGAGCTATGTGGTTCTACTGAGGAAGAAATTCAGCTACATAGAAAGCATACCAGGAGTTCTTCTACCACACCCTTCATCTTCTGCATACCCTTACAAAGTTGAAGGAGTAGTAGGATATGGTAACATCCCAGAACATGTtaatcatcatcatcatcattggcatcatcatttccaaggaacagttatccctccaccaacaccagcaACAACAGCTGAACTCTTCTATGATCATCATTTCAACAATGGCAACAGCACCATGGCATTGAAGATTACCCCATCAATGAGTAGCCTTGAGGCACTTCTCTCTAAGCTTCCTTCAGTGGTTCCCCCACAATCACAACAAGAACAAAGGGCGTTGGAGTTGATGGGGATTCAGAAAGTTGTAGCAAAAGAGGAGCTTGATAATGATGAGGTTTATAGGCCTGAGCTTGATGTTGGTGAGAGTAGCAGTTCCATGCATCAAGCCTATCATCATCATCATCAACAACAACACCATTTCCATCATCATAATAATAACAATAATAATAACAATAATAATAATAATAATATAACTAGTAGTGGAGCCAATAATAATAATAATGCATTCTGA 1239 0.3866 MMEEHLTPLAVTHLLQHTLRSLCIHDNSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAAPEINSGDCPNNNNNNNNGSSSSSSVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNEQEINFLSAWHNSADSHPRTWEAQFQSGIKDLHCLLMQTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGVVGYGNIPEHVNHHHHHWHHHFQGTVIPPPTPATTAELFYDHHFNNGNSTMALKITPSMSSLEALLSKLPSVVPPQSQQEQRALELMGIQKVVAKEELDNDEVYRPELDVGESSSSMHQAYHHHHQQQHHFHHHNNNNNNNNNNNNNITSSGANNNNNAF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01530 412 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 15 227 IPR025610 -
Aip05g01530 412 MobiDBLite consensus disorder prediction 385 412 - -
Aip05g01530 412 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN 2 387 - -
Aip05g01530 412 MobiDBLite consensus disorder prediction 362 412 - -
Aip05g01530 412 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 2 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01530 Aip-Chr5 25675957 25677884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01530 125 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 38.462 2.06e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01530 - - ahf:112750044 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01530 05 25675957 25677884 Aip05g01530 05 25675957 25677884 ECH