Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01518 ATGGAAGTTGGTGGGGTTGAAGAGAGCAATGCGAGATTGCTGGAAAGTGGAAGCAATGAAGGGAGTAGTATTGAGTCAAGGTGGGTTGATGGCAGTGAAGTGGATACTATGGAGGTTCCTGCATGGTCAAATGAGGGTAGAGAAGGGTATGGATCAGTGAGGAGGAGGCTTTTGAAGGGTCCCAAGAGATTGAATTCTTTGGATGTTGAAGTCATGGCCATCGCTAAGAGTCAAGATCAACACTCCAAGGATGCTTCACTTTGGCCCACTCTTGCATTAGCATTTCAGACTCTTGGCGTGGTATATGGGGACATGGGAACAAGTCCTCTCTATGTTTTTGCAGATGTCTTTAGCAAGGTTCCGATCGAGTCGGACGTTGATGTCTTGGGGGCCTTATCACTAGTAATGTACACAATAGCTCTTATTCCATTGGCAAAGTATGTTTTTGTTGTTCTCAAAGCAAATGACAATGGAGAAGGAGGAACGTTTGCGCTATACTCCTTGATCTGCAGATATGCAAATGTGAATATGCTTCCGAATCGTCAACCAGCCGATGAACATATCTCTAGTTTTAGGCTCAAACTCCCCACTCCAGAAATGAAAAGGGCTTTAAACATAAAGGAGACTTTGGAGAAGAGCTCATCTTTGAAAACCTTTTTGTTATTGTTGGTTCTGCTGGGAACTTCCATGATTATTGGAGATGGTATTCTAACCCCAGCAATATCAGTGATGTCTGCCATAAGTGGGCTGCAAGGTGAAATACATGGATTTGGTACAAATTCAGTGGTTCTTGTTTCAATAGTAGTCCTGGTAGCTTTGTTCAGCATACAGCGGTTCGGAACTAGCAAAGTTGGCTTCATGTTTGCACCTATACTTGCTTTATGGTTCTTTTGTCTTGGTTCTATTGGAATCTATAATATAGTTAAGCATGATATTATGGTTCTGAGAGCAATTAATCCGGCTTTTATTTTTTACTTCTTTAAGAAGAATGGCAAAAAGGCATGGTCAGCTCTTGGTGGTTGTGTTCTTTGTATTACAGGCGCAGAAGCAATGTTTGCCGATCTTGGTCATTTTTCGGTACCAGCGATACAGATTGCCTTTACTTGTGTGGTATTTCCATGTCTCCTCCTTGCTTATATGGGCCAAGCTGCTTTTTTGCTGAAGAACCCTACATCATATGCAAGAGTATTCTATGACTCTGTTCCAGGAAGTCTTTTCTGGCCAGTGTTTGTGATAGCCACACTTGCAGCTATGATAGCTAGCCAAGCAATGATATCGGCTACATTTTCATGCGTAAAGCAATCTATGGCTTTGGGGTGCTTTCCTCGGCTCAAGATAATTCACACCTCGAGAAAGTTCATGGGTCAAATTTACATCCCTGTAATTAACTGGTTTCTGATGGTCATGTGCATAGTTGTTGTCTCTATCTTCCAAAGCACTACTGATATTGCAAATGCTTATGGCATTGCTGAAGTTGGTGTCATGATAGTTAGCACAACCTTGGTGACACTAGTAATGCTTCTAATTTGGCAAACTAACTTGTTTTGGGCATTTTGTTTCCCAATTGCATTTGGATCGGTGGAGCTCATTTACATGTCGTCCGTCCTATCGAAAATCTTCGAGGGCGGCTGGCTTCCACTCGCCTTCGCCACCTTTTTCCTCTCCGTGATGTACACTTGGAACTACGGGAGCGTGTTGAAGTATAGAAGTGAAGTCCAGGAGAAAATTTCCTTAGACTTGATGCTTGAACTTGGATCAAATCTTGGAACGGTAAGAGTTCCGGGAATTGGATTGCTATATAATGAGCTTGTCCAAGGCATTCCTTCAGTTTTTTTACAGTTCTTGCTGAGTCTTCCGGCCCTTCACTCGACCATAGTTTTCGTCTGCATTAAACATGTTCCTATCCCGGTTGTACCTCAAGAGGAAAGGTTTCTATTCCGAAGAGTTTGTCCGAAAGATTACCATATGTTTCGCTGCGTCGCGAGGTATGGCTATAAAGATGTAAGGAAGGAGGATCACCATGCATTCGAGCAACTTCTCATCGAAAGTCTGGAGAAATTCTTGAGAAAAGAGGCTCAAGAAACTACCATGGAAAGCAGTAACTTAACTGAGGAGGACATGGACAATGCATTGGTGAAATCCAAGGATTCTGATAACAATAATGTAGCTGAGGAGCTAAGGATTCCATTGATGCATGGCCAGAATAGTTCCGAAGAAACTGGAACTTCAATCACCGAGGAAGCCCCGACAAGTTACATGTCATTAGATGAAGATGATGGTATTGAATATGAGCTTTCGGCACTTAGAGAAGCAACTGCATCAGGGTGCACGTATCTTCTTGGACATGGTGATGTGAGGGCCAAGAAGAACTCCTTGTTCTTCAAGAAATTGGTGATTAATTACTTCTATGCATTCCTTAGAAACAATTGCAGAGGAGGCACTGCAAATATGAGAGTGCCTCATACAAATATCATTCAAGTTGGGATGACATATATGGTCTAA 2502 0.4245 MEVGGVEESNARLLESGSNEGSSIESRWVDGSEVDTMEVPAWSNEGREGYGSVRRRLLKGPKRLNSLDVEVMAIAKSQDQHSKDASLWPTLALAFQTLGVVYGDMGTSPLYVFADVFSKVPIESDVDVLGALSLVMYTIALIPLAKYVFVVLKANDNGEGGTFALYSLICRYANVNMLPNRQPADEHISSFRLKLPTPEMKRALNIKETLEKSSSLKTFLLLLVLLGTSMIIGDGILTPAISVMSAISGLQGEIHGFGTNSVVLVSIVVLVALFSIQRFGTSKVGFMFAPILALWFFCLGSIGIYNIVKHDIMVLRAINPAFIFYFFKKNGKKAWSALGGCVLCITGAEAMFADLGHFSVPAIQIAFTCVVFPCLLLAYMGQAAFLLKNPTSYARVFYDSVPGSLFWPVFVIATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLMVMCIVVVSIFQSTTDIANAYGIAEVGVMIVSTTLVTLVMLLIWQTNLFWAFCFPIAFGSVELIYMSSVLSKIFEGGWLPLAFATFFLSVMYTWNYGSVLKYRSEVQEKISLDLMLELGSNLGTVRVPGIGLLYNELVQGIPSVFLQFLLSLPALHSTIVFVCIKHVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLEKFLRKEAQETTMESSNLTEEDMDNALVKSKDSDNNNVAEELRIPLMHGQNSSEETGTSITEEAPTSYMSLDEDDGIEYELSALREATASGCTYLLGHGDVRAKKNSLFFKKLVINYFYAFLRNNCRGGTANMRVPHTNIIQVGMTYMV 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01518 833 TIGRFAM kup: potassium uptake protein 93 833 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip05g01518 833 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 833 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip05g01518 833 Pfam K+ potassium transporter 94 667 IPR003855 GO:0015079|GO:0016020|GO:0071805
Aip05g01518 833 MobiDBLite consensus disorder prediction 12 26 - -
Aip05g01518 833 MobiDBLite consensus disorder prediction 1 29 - -
Aip05g01518 833 PANTHER POTASSIUM TRANSPORTER 12-RELATED 20 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01518 Aip-Chr5 25216027 25221561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01518 14 833 Inorganic Solute Cotransporters AT1G60160 74.007 0.0 1238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01518 K03549 - gmx:100814419 1307.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01518 05 25216027 25221561 Aip05g01518 05 25216027 25221561 ECH