Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01492 ATGGCTATCCACGACCATTCTTCCAACGTGACACCATCTTCGTTCTCTGATTCTTCAAACTTTTCTTCGCCGCCATCCCCTCATGCCTCCGACTCCTTCCGTAGATCACTCAAGAAAAAGTCCGATTCAAATTCATCGTCTGACGATCCATCACCAAAACCGAGTCCACGGCCTCCGCGTTCTCCGCCACCGCCGAAATCTCCACCACGGCCATCAAAGTCTCCACCACCACCACCCTCTCCGCGTCCACCAAAACACTCGCCTCCTCCAAAAACACCCCCGCCGCCGCCATCGCCAGTTCCGTCACCTCCGCCACCACGGGTTACACCTCCTCCACCCCCAACTTCAATAACGCCACCTGATTCACACTTTACTCCACCTCAAGTTACTCCTTCTCATCCTCCTCCTCCTCCTCCTCCTCCACCACCACCGCTGCCGCCGACAACTAGTTCCCCTCCAAACCACCCTACTACGCCGCCACAATCACCTTCTCCGCCTTCAAGATCAGGCGGTGATTCATCTTCTTCGAAGCGCCATTCTCCCCCAGCGTCGTCAACTTCGAATACACGAGGTTATAGTGATCGGATAGGCCAACATGTTGGTTTTGCAGTGGCTGCAATTTCCATCATTGCACTCATTGCTGTAATTCTCTTCTTTTTTTTTAGGAAGAAGAAAGATCGAGGCGATGCCGGTTGGCCACAAGGTGGAAATGTACACTACTACTACAAACAACCAGGCGGGGCCAATGGTCCGCAAGTAGGGATGTACGGTTCACAAAAAAAACAGTCTACTCCGGTGAGAGGCTACTATGGAGGTTACGTGAGATCACCTTCAGAGCTACAACAAATGAGTGGGGGTATAATGGCTTATAGCTACGAAGAAATCGTGGAAGTAACGAACGGGTTTTCGAGTGAGAACGTAATAGGAGAAGGTGGGTTCGGGAGTGTGTACAAGGCTTTAATGCCCGATGGTAGAGTAGGAGCAGTGAAGATGCTGAAACCTGGTAGTGGCCAAGGAGAGAGAGAGTTTAGGGCTGAGGTTGACATTATTAGTAGGATTCATCATCGTCATTTGGTTTCTTTGATTGGTTATTGCATAGCTGAGCAACATAGAGTTCTTGTCTATGAGTTTGTTCCTAATGGGAATCTCAGTCAGCACTTGCATGGAAATAACTTACCTGTTTTGGATTGGCCGAATAGGATGAAGATAGCAAATGGCGCTGCAAGGGGCATAGCGTATCTGCATGAGGGCTGCAACCCAAGGATTATTCATAGGGATATTAAGTCCGCAAACATACTTTTGGATGGTGCTTACGAAGCACAGGTTGCAGACTTTGGACTTGCCAAACTAACTGATGACGCTAACACCCATGTATCAACCAGGGTGATGGGGACCTTCGGATACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCATTTGGAGTTGTCCTGCTTGAGCTCATAACTGGAAGGAAGCCCGTTGATCCAAAGCGGCCCATCGGAGAAGAGAGTTTGGTTGAGTGGGCTCGTCCACATCTTCTTCTTGCAATGGGGACGCGTGCGTTTGGTGATCTAGAAGACCCAAGGCTTCAAGGACGCTATGTTCATTCTGAAATGTTAATCATGATTGAGGCTGCTGCCGCATGTGTTCGCCACTCTGCTCCTAAACGCCCCCGTATGGTTCAGGTGGCAAGAGCCTTAGAGTGTGGAGAACAACTAGATCTATCAAATGGGGTGAAATATGGTCAAAGCAGAATATATGATTCAAGCCAGTACATTAATGATATTATGAGATTTAGAAGGATGATGGCTGATGGCAATTTTAGCGGTTACGACTATGATATGTATAGTACAGAACACAGTTCAAGAGAGTTGTCTCCTTCTTTAGGGATGCCAACTAGTTCAGGTGGTAATTCAGAACCTAGATCTTTCAACAACCATAGGAGCTTCTCTGAGTCTGAGCAACCATAA 1995 0.4807 MAIHDHSSNVTPSSFSDSSNFSSPPSPHASDSFRRSLKKKSDSNSSSDDPSPKPSPRPPRSPPPPKSPPRPSKSPPPPPSPRPPKHSPPPKTPPPPPSPVPSPPPPRVTPPPPPTSITPPDSHFTPPQVTPSHPPPPPPPPPPPLPPTTSSPPNHPTTPPQSPSPPSRSGGDSSSSKRHSPPASSTSNTRGYSDRIGQHVGFAVAAISIIALIAVILFFFFRKKKDRGDAGWPQGGNVHYYYKQPGGANGPQVGMYGSQKKQSTPVRGYYGGYVRSPSELQQMSGGIMAYSYEEIVEVTNGFSSENVIGEGGFGSVYKALMPDGRVGAVKMLKPGSGQGEREFRAEVDIISRIHHRHLVSLIGYCIAEQHRVLVYEFVPNGNLSQHLHGNNLPVLDWPNRMKIANGAARGIAYLHEGCNPRIIHRDIKSANILLDGAYEAQVADFGLAKLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPKRPIGEESLVEWARPHLLLAMGTRAFGDLEDPRLQGRYVHSEMLIMIEAAAACVRHSAPKRPRMVQVARALECGEQLDLSNGVKYGQSRIYDSSQYINDIMRFRRMMADGNFSGYDYDMYSTEHSSRELSPSLGMPTSSGGNSEPRSFNNHRSFSESEQP 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01492 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Aip05g01492 664 MobiDBLite consensus disorder prediction 32 46 - -
Aip05g01492 664 CDD STKc_IRAK 308 576 - -
Aip05g01492 664 MobiDBLite consensus disorder prediction 51 166 - -
Aip05g01492 664 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 36 642 - -
Aip05g01492 664 MobiDBLite consensus disorder prediction 1 30 - -
Aip05g01492 664 Gene3D Transferase(Phosphotransferase) domain 1 378 589 - -
Aip05g01492 664 MobiDBLite consensus disorder prediction 167 192 - -
Aip05g01492 664 Pfam Protein tyrosine and serine/threonine kinase 305 503 IPR001245 GO:0004672|GO:0006468
Aip05g01492 664 MobiDBLite consensus disorder prediction 630 664 - -
Aip05g01492 664 SUPERFAMILY Protein kinase-like (PK-like) 278 575 IPR011009 -
Aip05g01492 664 SMART serkin_6 302 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01492 664 Gene3D Phosphorylase Kinase; domain 1 273 377 - -
Aip05g01492 664 PRINTS Proline rich extensin signature 44 56 - -
Aip05g01492 664 PRINTS Proline rich extensin signature 61 77 - -
Aip05g01492 664 PRINTS Proline rich extensin signature 81 93 - -
Aip05g01492 664 PRINTS Proline rich extensin signature 94 115 - -
Aip05g01492 664 ProSiteProfiles Protein kinase domain profile. 302 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01492 664 MobiDBLite consensus disorder prediction 1 192 - -
Aip05g01492 664 PANTHER RECEPTOR-LIKE KINASE 36 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01492 Aip-Chr5 24219606 24224051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01492 181 632 Trihelix Transcription Factor Family AT1G70460 56.303 4.63e-173 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Aip05g01492 PK_Tyr_Ser-Thr 9.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01492 - - lja:Lj2g3v1414850.1 622.083