Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01473 ATGTCAACTTTGAATCAACTGTTTGATCTTCCAGAACAGATATGTTATGTCCAATGTGGATTCTGCACTACCATCTTGATGGTGAGTGTGCCATGCAGCAGCATGTCAATGGTGGTGACAGTGAGATGCGGACACTGCACAAGCCTTCTCTCTGTGAATATGATGAAAGCTTCTTTTGTCCCTTTACACCTCTTAGCTTCTCTTTCTACTCATCATCATCATCATTCAAAAGAAGAGGATGCAAACAACATCGCAACTAACAGTTCTTCATCCATAATGATGATGAACTACTCTTCTAATGATTGTGCAGAAGAGGATGTAACCACAATCAACAATGTTGTCAACAAACCACCGGAGAAAAGACAGCGAACTCCATCAGCTTATAACCGATTCATCAAAGAAGAGATTAAAAGGCTAAAGGCAGAAAACCCTGAAATGGCACACAAGGAGGCTTTCAGTACTGCTGCCAAAAATGTATTTATAATGCTGAAATATATTAGTCATTTTCAGTGGGCCAATTTTCCACCAACTCAGTTAAACGGAGATGAAGAAATTTGCAATCAGAAAGAGCAATTTGCGGATCTGGACTCCCAAGTGGACCGTCATTCTCATTCTCATGAGAGCATCAACGAAGAAGGTGAAGGTTTCCATGGAAGAAAGATGCAAAGAAATTCCATCATGGCAAGGACACAACTTGAATGA 702 0.4046 MSTLNQLFDLPEQICYVQCGFCTTILMVSVPCSSMSMVVTVRCGHCTSLLSVNMMKASFVPLHLLASLSTHHHHHSKEEDANNIATNSSSSIMMMNYSSNDCAEEDVTTINNVVNKPPEKRQRTPSAYNRFIKEEIKRLKAENPEMAHKEAFSTAAKNVFIMLKYISHFQWANFPPTQLNGDEEICNQKEQFADLDSQVDRHSHSHESINEEGEGFHGRKMQRNSIMARTQLE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01473 233 PANTHER PROTEIN YABBY 6-RELATED 1 198 IPR006780 GO:0007275
Aip05g01473 233 MobiDBLite consensus disorder prediction 203 219 - -
Aip05g01473 233 Gene3D High mobility group box domain 113 207 IPR036910 -
Aip05g01473 233 PANTHER AXIAL REGULATOR YABBY 4 1 198 - -
Aip05g01473 233 SUPERFAMILY HMG-box 111 155 IPR036910 -
Aip05g01473 233 MobiDBLite consensus disorder prediction 203 233 - -
Aip05g01473 233 Pfam YABBY protein 11 158 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01473 Aip-Chr5 23709094 23711414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01473 2 233 C2C2-YABBY Transcription Factor Family AT1G23420 52.500 1.71e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aip05g01473 YABBY 3.3e-58 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01473 K25796 - gmx:100806755 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01473 05 23709094 23711414 Aip05g01473 05 23709094 23711414 ECH
Aip05g01473 05 23709094 23711414 Aip05g01473 05 23709094 23711414 PCT