Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01469 ATGATGTTTTCGGTTCGTTCAATTTGTTTCGCGTGCTGTGCAAATATTTGTCTATTTGAAAATCCAATAACAAAGCTCCACTATTGTGTGTTGTTGTTTGTCATACTATTTCACCTCAACTACATTACCACCTTCAAGGTTGTTATTTGTTCTGTATTAGGTGAACATGTCTTCTTCCAGGAACAAGGGCAAGCGACCTGCAACAGACGCTCAACGAAACCAGCAACACCTGCGACTGCATTTTCTGAAGCCAATCATAAGGCCCGCCTGCTTCAAACTAGTAAGGCACCTCCCCTGACCCACGAAATCCCGAACAAGACTCCCTACATAAATCTGGTGGTTCCTGATGGAAGGGATATCAGCTTTCGGTGCTTCTGGAAAGAACAGCAAAATGGCAGCATCACATTGACCCGAGGTTGGCCAGAGTTCTACCGGACGTACCAAATAAATCTAGACTCCATGCTTCTTTTCAAACACAAGGGCAAGTCTGACTTCCAGGTACATATCTTCGACTTCGGTGGCTGCAAAAACACATACCAACCCCAACCGTCCGAGGAACCGCCGTACGAAAAGAAAGGTACTTACCAGCGTGCCCACTGTATCAATAATCCTTCCTCAGAAAAGGCGAAAGAGATAGCTGAAAAACACAAGACCAAATGGCCCTTCTTTATCATGGACCTCACTAGCCGTGTCTTGTCCTCCCACCTGTTGTCAAATGTCCCTCATCTGAGCCATTTCATTGGTCAGAGGCACACACTCATCCTTGCACATGGTCACATTGAGGTGGAGGCCACCTACACCAAATTTAGTGGGAGACGTGACGGTAGCTTCGGAGTCATCTCCGGAGGATGGTCATACTTTGCTACCCTGTGCAAATTCGATCCTGGAGGTGTAGGGATCTTCGAGGTCATCTCAACTGAGACAGTCATAGTACTTATCTGCAACGCTCACTACGTGTCGTCGCCGCTGTTGAAGACCGTCAAACACCTTCGCCATTCAATCATCCATCCTCGAACCCTCATGGCGGCAACGCATTTCGTTGCTGAGCATATGGAGCTCTCCCTAAGTGGTCGCCGTTGCGCCGAAGACTCGCCAAATCTAGTCTCCATTTCATCGGTGCCCTGA 1125 0.4791 MMFSVRSICFACCANICLFENPITKLHYCVLLFVILFHLNYITTFKVVICSVLGEHVFFQEQGQATCNRRSTKPATPATAFSEANHKARLLQTSKAPPLTHEIPNKTPYINLVVPDGRDISFRCFWKEQQNGSITLTRGWPEFYRTYQINLDSMLLFKHKGKSDFQVHIFDFGGCKNTYQPQPSEEPPYEKKGTYQRAHCINNPSSEKAKEIAEKHKTKWPFFIMDLTSRVLSSHLLSNVPHLSHFIGQRHTLILAHGHIEVEATYTKFSGRRDGSFGVISGGWSYFATLCKFDPGGVGIFEVISTETVIVLICNAHYVSSPLLKTVKHLRHSIIHPRTLMAATHFVAEHMELSLSGRRCAEDSPNLVSISSVP 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01469 374 Gene3D - 81 175 IPR015300 -
Aip05g01469 374 Gene3D - 201 318 IPR015300 -
Aip05g01469 374 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 111 180 - -
Aip05g01469 374 SUPERFAMILY DNA-binding pseudobarrel domain 97 178 IPR015300 -
Aip05g01469 374 PANTHER B3 DOMAIN-CONTAINING 111 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01469 Aip-Chr5 23585028 23587184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01469 123 312 REM Transcription Factor Family AT4G31640 25.253 3.42e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01469 - - aip:107615148 339.347