Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01461 ATGGTTATCAATGCTACTTCTGCAAGTGCTTGCCCCCCACCCATGAAACCAACATCAAATGGTGTGTTTCAAGGAGATAACCCTCTTGATTTTGCACTCCCGATGGCTATTTTACAGATATGCCTAGTATTTGTAGTCACAAGAGGATTGGCATATATTATAAGGCCTTTGAGGCAGCCAAGAGTCATTGCAGAGATTGTGGGAGGAATATTACTTGGGCCATCAGCATTAGGACGAAATAAAAGCTATTTGAATGCTGTTTTCCCCTCCAAGAGTCTTACAGTACTGGATACTCTGGCAAATATTGGCCTTTTGTTCTTTCTATTCCTTGCAGGCCTAGAGTTAGATCCTAGATCTTTGCGTCAAACAGGAAAACAGACCCTTGCCATTGCTATTGCTGGAATAAGTATACCTTTTGCCTTGGGAATTGGTTCATCATTTGTTCTTAAAGAAACAATTGCCAAAGGTGTAAATGGTACTGCATTTCTTGTGTTTATGGGTGTTGCTCTATCCATAACTGCTTTCCCTGTGTTGGCTCGTATTTTGGCCGAGTTGAAACTTCTAACCACCAATGTTGGTAGAATGGCTATGTCGGCCGCAGCAGTAAATGATATTGCTGCTTGGATTCTGCTTGCACTTGCTGTTGCCTTGTCGAGCGATAGCGAGTCTCCACTAGTGTCATTGTGGGTCTTCTTATGTGGATGTGGTTTTGTTCTTTGTTCAATCATCATTGTCCCTCCGATTTTCAAAAGGATTACACAACGATGTAATGAAGGCGAGCCGGTGGATGAGATATATATATGTGCTACATTAGTTGTTGTTTTGGCCGCGGGTTTTGTTACAGATGCTATTGGAATCCATGCCATGTTTGGTGCATTTGTTGTTGGTGTGTTGATTCCAAAAGATGGACCATTTACCAGTGCTCTTGTGGAGAAAGTAGAGGATCTTGTTTCGGGCATTTTCCTCCCACTCTTTTTTGTGTCAAGTGGATTGAAGACCAACATATTCACCATTCACGGCCTGCAGTCATGGGGTATTCTGGCCTTAGTTATTTTCACTGCTTGTTTTGGGAAGATTGTTGGAACCGTTGTTGTATCACTCTTCTGTAAAGTACCCTTGAAGGAGGCTTTAGCTCTGGGATTCCTAATGAACAGTAAGGGCTTGGTTGAATTGATTGTTCTCAACATTGGCAAAGATAGGAAGGTTTTAAATGATCAAACCTTTGCCATTATGGTTCTTATGGCAGTATTTACCACATTCATTACCACTCCTCTTGTCATGGCTGTGTATAAACCTGCAAGAAGGGGAAAAATAGATGATTACAAATACAAAACAATTGCAAGGAAGAACACAAACAGCCAATTGAGGATTCTTTGCTGTTTCCATAATGCAAGAAATATTCCATCAATGATAAACTTGATTGAAGCCTCAAGAGGAATCCAGAAGTCCGGTGGAATTTGTGTGTATACAATGCACCTCAGAGAATTTTCTGAGAGGTCATCAACAATCTTAATGGTACATAAGGCAAGGAAAAATGGGTTGCCATTCTGGAATAAGGGTCATCCCTCTGATGCTGATCATTTAATTGTGGCATTTGAGGCTTACCGTCAACTGAGTCAAGTGTCTGTCAAACCAATGACCGAAATCTCATCTATGGCAGACATGCACGTAGACATTTGTGCAACTGCTGGGGGAAAGAAAGCTGCAGTAATCATTCTTCCGTTTCATAAGCACCAAAGATTGGATGGCTCATTAGAGACAACAAGAAGTGATTTTAAATATGTTAACAGAAGGGTCCTTGAGAATGCTCCATGCTCAGTTGGAATTCTCGTTGATCGTGGCCTTGGTGGTACATCCCATATATCTGCAAGCAATGTTTCTTATTCCATTACAGTGCTTTTCTTTGGTGGAAGTGATGATCGCGAGGCCCTCGCTTATGGTGCTCGAATGGCCGAGCACCCTGGCATAAGATTGGTGGTTCTTGGCTTTGTCGTGGAACCAAGTACCACAGGAGATATCGTTAGAGTGGATGTGGGAGAATCCTCTTCCAGCGCCAAATTAGTCTCAGAGGACGAGGAGTTCCTTAATGAATTCAAGGCAAAAGTAGCTAACGATGATTCTGTGACATGTGAAGAGAAAGTAGTAAAGGATGCAGCAGAAACAGTTGCTGTGATCTGCGAGTTCACTCATTGCAATCTGGTTCTTGTGGGTCGAAGGCCACAAGGTGAATTGGCATATGCTCTCAAGAGAAATGAATATCCGGAACTTGGACCAATTGGTTCTTTGCTGGTATCTCAAGATTGCCCGACAATAGCATCCGTCTTGAATATAGAGATAGAAGTAGTTGAGGAAACGGTTGTGAAAGTAGAGGAAAGCCAAGCAGAAGAAGACGATGCAGCAATATCGAGTTTTTCGATGCCTATACAGCTCAAGAACTTTCTACAGTTCTCAAGCTTTAGGGGGCACCAAAATGCTCACAAAAAAGAGAGAACAACTAGAAGAAACGCCAAGAGGGCTTCTGCTGAGCACTCGTATCTTCTATTTGCTTCTTCGCTGTGGACCCCTCCTACGGTTTTTCCTTCAACCTTCATCACTGCGGCGAATCTCGCGTATTTCCCAAGCCGCCATATTTCAGAAGGATTTGGATCAAATGGCGAACATGAATTTGCTGGAGATAATGGTGTGTTTCCTTACCGATTAAGTGAGGATATTGATGAGAGAAGTTTCGGTGATTGGCAAAGAAGCCTTGGAAGAAGCAGTAGCTTCAACAGTGTTGACACTTGA 2784 0.4256 MVINATSASACPPPMKPTSNGVFQGDNPLDFALPMAILQICLVFVVTRGLAYIIRPLRQPRVIAEIVGGILLGPSALGRNKSYLNAVFPSKSLTVLDTLANIGLLFFLFLAGLELDPRSLRQTGKQTLAIAIAGISIPFALGIGSSFVLKETIAKGVNGTAFLVFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDIAAWILLALAVALSSDSESPLVSLWVFLCGCGFVLCSIIIVPPIFKRITQRCNEGEPVDEIYICATLVVVLAAGFVTDAIGIHAMFGAFVVGVLIPKDGPFTSALVEKVEDLVSGIFLPLFFVSSGLKTNIFTIHGLQSWGILALVIFTACFGKIVGTVVVSLFCKVPLKEALALGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMAVFTTFITTPLVMAVYKPARRGKIDDYKYKTIARKNTNSQLRILCCFHNARNIPSMINLIEASRGIQKSGGICVYTMHLREFSERSSTILMVHKARKNGLPFWNKGHPSDADHLIVAFEAYRQLSQVSVKPMTEISSMADMHVDICATAGGKKAAVIILPFHKHQRLDGSLETTRSDFKYVNRRVLENAPCSVGILVDRGLGGTSHISASNVSYSITVLFFGGSDDREALAYGARMAEHPGIRLVVLGFVVEPSTTGDIVRVDVGESSSSAKLVSEDEEFLNEFKAKVANDDSVTCEEKVVKDAAETVAVICEFTHCNLVLVGRRPQGELAYALKRNEYPELGPIGSLLVSQDCPTIASVLNIEIEVVEETVVKVEESQAEEDDAAISSFSMPIQLKNFLQFSSFRGHQNAHKKERTTRRNAKRASAEHSYLLFASSLWTPPTVFPSTFITAANLAYFPSRHISEGFGSNGEHEFAGDNGVFPYRLSEDIDERSFGDWQRSLGRSSSFNSVDT 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01461 927 Gene3D - 497 750 - -
Aip05g01461 927 Gene3D - 35 438 IPR038770 -
Aip05g01461 927 PANTHER CATION/H + ANTIPORTER 7 790 - -
Aip05g01461 927 Pfam Sodium/hydrogen exchanger family 42 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip05g01461 927 PANTHER CATION/H(+) ANTIPORTER 18 7 790 - -
Aip05g01461 927 CDD USP_Like 636 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01461 Aip-Chr5 23247812 23254834 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01461 7 778 Antiporter Super Family AT5G41610 69.705 0.0 1074
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01461 - - gmx:100810155 1215.29