Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01452 ATGATTAAAACAATCCTTCTCATCCCTTCTCAATTCATTATTTTCCTTCTCATCAACTCAGTACTACTCTCAGACACTGTAATGGCAGAACCAAGGGCAAGAACAATCCAAATAGCATGTGGTCATCAACTAGAGCACAATAGCACCATCTATGTTCCGAATTTCGTTGCAACCATGGAGAAAATCAGTGAACAGATGCGAAGTACCGGCTTTGGAACAACAGTTACAGGGACAGGACTTGATACTAACTATGGCCTAGCTCAGTGCTATGGAGATCTTTCATTGCTTGATTGTGTGCTATGTTATGCTGAGGCAAGGACGGTTCTTCCTCAGTGCTTCCCTTTCAATGGTGGCCGCATTTACCTCGATGGTTGCTTCATGAGGGCCGAGAATTATAGCTTCTTTGATGAGTATACAGGAGCAGGAGATAATGCAGTGTGTGGGAACAGAACAAGGAAGAACTCAAGTTTTCAAGAATCTGCAAAGCAAGCAATTCTAACAGCAGTTCAAGATGCACTTAGCAATAAAGGATATGCTAGAGGGAAGGTCGCCGTGGCCGGAACGGTTAATGAGTCTGCTTATGTGCTGGCTGATTGTTGGAGGACTTTGAACACAAGCTCTTGTAAAGCATGTCTTCAGAATGCATCAGCTTCTCTGTTGGGATGCTTGCCTTGGGAAGAAGGCCGCGCGCTTAACACCGGTTGCTTCATGAGGTTCTCAGACAAAGATTTCCTCAACAAGCAGCAGGAAAATGGAAGCTCAAAGGGTAATGTAATAGTTCTGGTGGTTGCAGTGGTTAGTTCATTGATTGTTTTTGTGGTTGGAATAGCTATTGGGATATATATCTTGAAACTTAGATACATTCAAAAGAAAAGAAGAGGTTCATATGATACAGAAAAGCTAGCAAAGTCCCTTCGCCGCAGTAGCCTGAATTTCAAGTACACTTCACTGGAAAGGGCTACTGGATCCTTTGATGAGACTAACAAGTTAGGACAAGGAGGGTTTGGAACAGTTTACAAAGTAGTTATCTTATCTGCATACCTATATCCCAACCATTTTAACATAAGAATGCAACTATATAACAATTTTCTATTGCAGGGAGTTCTACCTGATGGAAGAGAGATTGCTATCAAGAGGCTATATTTCAATAACAAACATAGAGCAGGAGATTTCTACAATGAAGTGAACATAATCAGTAGCGTGGAACACAAGAATCTAGTCCGACTGTTAGGATGCAGTTGTTCAGGACCCGAAAGCCTGCTTGTGTATGAATATCTGCCCAACAGAAGTCTCGATCGCTTCATTTTTGACAAGAATAAGGGAAGAGAACTGAACTGGGAGAAGAGATACGAAATCATCATTGGGACAGCTGAAGGATTAGCATACCTACATGAGAATTCTAAAACCAAAATAATTCACAGAGATATAAAAGCCAGCAACATCCTCTTGGATGCAAAGCTTCGTGCTAAAATCGCAGATTTTGGCTTGGCTAGATCCTTTCAAGAAGATAAGAGCCATATAAGTACAGCTATTGCAGGAACTTTGGGTTATATGGCTCCAGAGTACATAGCTCATGGTCAGTTAACAGAAAAGGCAGATGTGTATAGTTTTGGAGTGCTACTGCTAGAGATAGTTACCGGGAGACAGAACAACAGGAGCAAAGCAGCTGAATATTCAGACAGCCTAATTACAGTGGTATGGAAGCATTTCCAGATGGGGACTGCAGCACAATTATTTGATCCAAATCTTCAGTTGCATAACCACAACAGCAGCAATACTAAGAATGAGGTTTTAAGAGTGGTTCATATAGGTCTTCTATGCATCCAAGAGAACCCTACACTGAGACCAACTATGTCAAAGGCACTACATATGTTAACAAAGAAGGAGGAGCACCTTGCTGCTCCCTATAATCCACCCTTCCTAGATGAGAGTACCATGGAACTGCACGACATGAGTAGCGACCCATCTTCCCCTCTCAATGTACCAACATCAATTGCTACCATGTCGCATAGCTCGTTTTATCCGAGGTGA 2031 0.421 MIKTILLIPSQFIIFLLINSVLLSDTVMAEPRARTIQIACGHQLEHNSTIYVPNFVATMEKISEQMRSTGFGTTVTGTGLDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPFNGGRIYLDGCFMRAENYSFFDEYTGAGDNAVCGNRTRKNSSFQESAKQAILTAVQDALSNKGYARGKVAVAGTVNESAYVLADCWRTLNTSSCKACLQNASASLLGCLPWEEGRALNTGCFMRFSDKDFLNKQQENGSSKGNVIVLVVAVVSSLIVFVVGIAIGIYILKLRYIQKKRRGSYDTEKLAKSLRRSSLNFKYTSLERATGSFDETNKLGQGGFGTVYKVVILSAYLYPNHFNIRMQLYNNFLLQGVLPDGREIAIKRLYFNNKHRAGDFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEYLPNRSLDRFIFDKNKGRELNWEKRYEIIIGTAEGLAYLHENSKTKIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYIAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKAAEYSDSLITVVWKHFQMGTAAQLFDPNLQLHNHNSSNTKNEVLRVVHIGLLCIQENPTLRPTMSKALHMLTKKEEHLAAPYNPPFLDESTMELHDMSSDPSSPLNVPTSIATMSHSSFYPR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01452 676 Gene3D Transferase(Phosphotransferase) domain 1 426 636 - -
Aip05g01452 676 Gene3D Phosphorylase Kinase; domain 1 286 425 - -
Aip05g01452 676 Pfam Protein tyrosine and serine/threonine kinase 327 623 IPR001245 GO:0004672|GO:0006468
Aip05g01452 676 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Aip05g01452 676 Gene3D - 33 134 IPR038408 -
Aip05g01452 676 Gene3D - 144 244 IPR038408 -
Aip05g01452 676 SUPERFAMILY Protein kinase-like (PK-like) 308 657 IPR011009 -
Aip05g01452 676 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Aip05g01452 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Aip05g01452 676 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 366 657 - -
Aip05g01452 676 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 366 657 - -
Aip05g01452 676 SMART serkin_6 324 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01452 676 CDD STKc_IRAK 330 627 - -
Aip05g01452 676 Pfam Salt stress response/antifungal 49 132 IPR002902 -
Aip05g01452 676 Pfam Salt stress response/antifungal 150 241 IPR002902 -
Aip05g01452 676 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 11 342 - -
Aip05g01452 676 ProSiteProfiles Protein kinase domain profile. 324 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01452 676 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 11 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01452 Aip-Chr5 22688231 22765999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01452 27 676 Receptor kinase-like Gene Family AT1G70520 64.877 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip05g01452 PK_Tyr_Ser-Thr 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01452 - - lja:Lj2g3v1415230.1 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01452 05 22688231 22765999 Aip05g01452 05 22688231 22765999 ECH
Aip05g01451 05 22677095 22680611 Aip05g01452 05 22688231 22765999 PCT
Aip05g01452 05 22688231 22765999 Aip05g01452 05 22688231 22765999 PCT