Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01431 ATGGCTTCTTTTACTCATCAACTCCCTCTTCTGCTTACCTTTGTGGCATCATTTGCATTTGTTCTTACCACAACTAGTGTGTTCTCATCGAAAGTTTCAATGAAAGAAACAATTTTGGAACCTTTCAAGTGCTCCACAAACATAAAAACATGCAATGCCTCACTCTACCACATAACCTACGGTGATAATGATGATGACCAAACCATACAACATTACATATCTTCCAATTACACAAACTCCTCCCAAATCAGACCAATCACACGTGGCACAAGACAAGACCACCTCATAACAGTGCCTTGTTCATGCAGAAACAACAACAACCTCACCGGTTATTACTATGACACAACCTACACTGTGAAGCCAAATGATAATTTCTATGACATTAATAACTTTGTTTACAGTGGTCAAGCGATGCTTATAAATGGTGTTTTGTACCCGGGTCAGAAACTGAGTATTCATATTCCTTGTGGGTGTTCAGAAATTGAGTCACAAATTGTTGTGACTTACACGGTTCAAAGAAATGATACCTCATCTGAAATAGCTAAGCTTTTGAATTCTACGGTTGCTGAGATGGAGAGTGTGAATCATCTTTTGGATCAGAACCCATCATACATAGATGTGGGTTGGGTTTTGTTTGTTCCTAGCCATTTTAATGGAATTCCACTGCCTCCAACAAAAGAAAAGAAACCAAAGTGGCAGATAATCATTGGGGTCTTAGTGAGTGTGACATTACTTTCAGTGATTGCCGTCATCTTTCTCATTCTCAGGAGAAATAGGGATACCGCAGCATCCGCCACAAATAATCCAAAAAGTGTCACTAAAAGATCAATTTCCAAAAAGAACTCTGACATTCATAAAGAATACATGCAAGATGCTACATCATTTGAGTCAGAAAGACCAGTAATTTACTCAATTGAGGAGATAGAAGATGCCACAAATAACTTCGATGAAAACAGAAGAATTGGGGTTGGTGGATATGGCAGTGTATATTTTGGAATGTTAGGCCACAAGGAGGTTGCTGTGAAGAAGATGAAGTCCAATAAATCCAAGGAGTTCTTCGCAGAACTCAAGGCCTTATGTAAGATCCATCACATAAACATTGTGGAGTTGTTAGGGTATGCAAGTGGAGATGACCACCTTTATTTGGTGTATGAGTATGTTGCAAATGGATCTCTGAGTGATCATCTTCATGATCCTTTACTTAAAGGACATCAGGCTCTATCTTGGTGTGCTAGGACTCAGATTGCATTGGATGCAGCAAAAGGAATTGAATACATACATGATTACACAAAAGCACAATATGTTCACCGTGATATAAAGACTACTAACATTCTTCTTGATCAGAAACTCAGAGCCAAGGTAGTAGCAGATTTTGGCCTTGCAAAACTGGTGGAACGGACAAATGATGAAGAATTCATTGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCTGAATCTGTGAAAGAATTACAAGTGACCATAAAAACGGATGTGTTTGCATTTGGAGTAGTTCTATCAGAGCTGATAACAGGAAAACGTGCGCTATTTCGTGACAGCCAAAAACCCAATCAAATGGAATCTCTTATTTCACTTGTTAAGAAAATATTCCAAGATAATGATCCCGTCACTGCTTTAGAAAATGTTACAGATATGAATCTTCAACATAACTATCCTATAGACGGTATCTACAAGATGGGAGAAATAGCAGAGTGGTGCATGAGGGAGGAACCAATGGAGAGGCCTGAAATGAAGGAGATAGTTGGCGCGTTGTCACAGATAGTTATGACATCCATCGAGTGGGAAGCATCGCTCGGAGGAGATAGCCAAGTTTTCAGCGGCGTATTTATTGGAAGATAA 1863 0.3951 MASFTHQLPLLLTFVASFAFVLTTTSVFSSKVSMKETILEPFKCSTNIKTCNASLYHITYGDNDDDQTIQHYISSNYTNSSQIRPITRGTRQDHLITVPCSCRNNNNLTGYYYDTTYTVKPNDNFYDINNFVYSGQAMLINGVLYPGQKLSIHIPCGCSEIESQIVVTYTVQRNDTSSEIAKLLNSTVAEMESVNHLLDQNPSYIDVGWVLFVPSHFNGIPLPPTKEKKPKWQIIIGVLVSVTLLSVIAVIFLILRRNRDTAASATNNPKSVTKRSISKKNSDIHKEYMQDATSFESERPVIYSIEEIEDATNNFDENRRIGVGGYGSVYFGMLGHKEVAVKKMKSNKSKEFFAELKALCKIHHINIVELLGYASGDDHLYLVYEYVANGSLSDHLHDPLLKGHQALSWCARTQIALDAAKGIEYIHDYTKAQYVHRDIKTTNILLDQKLRAKVVADFGLAKLVERTNDEEFIATRLVGTPGYLPPESVKELQVTIKTDVFAFGVVLSELITGKRALFRDSQKPNQMESLISLVKKIFQDNDPVTALENVTDMNLQHNYPIDGIYKMGEIAEWCMREEPMERPEMKEIVGALSQIVMTSIEWEASLGGDSQVFSGVFIGR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01431 620 ProSiteProfiles Protein kinase domain profile. 315 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01431 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Aip05g01431 620 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 22 620 IPR044812 GO:0019199|GO:0045087
Aip05g01431 620 Gene3D LysM domain 158 218 IPR036779 -
Aip05g01431 620 Pfam LysM domain 169 214 IPR018392 -
Aip05g01431 620 Gene3D Transferase(Phosphotransferase) domain 1 387 605 - -
Aip05g01431 620 SMART serkin_6 315 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01431 620 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 22 620 - -
Aip05g01431 620 ProSiteProfiles LysM domain profile. 167 213 IPR018392 -
Aip05g01431 620 SUPERFAMILY Protein kinase-like (PK-like) 298 592 IPR011009 -
Aip05g01431 620 CDD LysM 167 213 IPR018392 -
Aip05g01431 620 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Aip05g01431 620 SUPERFAMILY LysM domain 167 214 IPR036779 -
Aip05g01431 620 Pfam Protein kinase domain 316 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g01431 620 Gene3D Phosphorylase Kinase; domain 1 292 386 - -
Aip05g01431 620 SMART LysM_2 168 214 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01431 Aip-Chr5 22069641 22074650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01431 295 620 Receptor kinase-like Gene Family AT1G51940 50.904 6.08e-112 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip05g01431 Pkinase 9.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01431 - - gmx:100800907 826.239